CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

OPUNC01G07600 *(Oryza punctata)* AP2
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00847 (AP2)	IPR001471	OPUNC01G07600	T003683_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
CRF2 M01622_2.00	Arabidopsis thaliana	SCGCCGCC	GGCGGCGS	PBM Weirauch et al.(2014) pTH8680	0.708	0.745
ERF11 M01606_2.00	Arabidopsis thaliana	NHGCCGNHNN	NNDNCGGCDN	PBM Weirauch et al.(2014) pTH8117	0.702	0.681
ERF11 M06575_2.00	Arabidopsis thaliana	NHNNHDSCGCCGYCRHHNNN	NNNDDYGRCGGCGSHDNNDN	Dap-seq OMalley et al.(2016) ERF11_colamp_a	0.702	0.681
ERF11 M06576_2.00	Arabidopsis thaliana	NHNYCKCCGCCGYHD	HDRCGGCGGMGRNDN	Dap-seq OMalley et al.(2016) ERF11_col_b	0.702	0.681
ERF069 M01604_2.00	Arabidopsis thaliana	NNGCCGNNN	NNNCGGCNN	PBM Weirauch et al.(2014) pTH7550	0.693	0.702
ERF098 M01618_2.00	Arabidopsis thaliana	NNGCCGNC	GNCGGCNN	PBM Weirauch et al.(2014) pTH8259	0.692	0.702
CRF3 M01633_2.00	Arabidopsis thaliana	NNGCCRNNN	NNNYGGCNN	PBM Weirauch et al.(2014) pTH8110	0.690	0.723
ERF10 M06562_2.00	Arabidopsis thaliana	NNHNNHNHHDYCGCCGCCRYN	NRYGGCGGCGRHDDNDNNDNN	Dap-seq OMalley et al.(2016) ERF10_col_a	0.685	0.681
ERF10 M06563_2.00	Arabidopsis thaliana	HDSCGCCGCCRHHDNNNNNN	NNNNNNHDDYGGCGGCGSHD	Dap-seq OMalley et al.(2016) ERF10_colamp_a	0.685	0.681
ERF104 M06682_2.00	Arabidopsis thaliana	NNHHDYMDCCGCCGCCRYH	DRYGGCGGCGGHKRHDDNN	Dap-seq OMalley et al.(2016) ERF104_col_a	0.684	0.681
ERF104 M06683_2.00	Arabidopsis thaliana	BHDSCGCCGCCRYHD	HDRYGGCGGCGSHDV	Dap-seq OMalley et al.(2016) ERF104_colamp_a	0.684	0.681
ERF4 M01616_2.00	Arabidopsis thaliana	VCGCCGCC	GGCGGCGB	PBM Weirauch et al.(2014) pTH8156	0.684	0.702
ERF4 M06616_2.00	Arabidopsis thaliana	YCDCCGCCGCCRHHD	HDDYGGCGGCGGHGR	Dap-seq OMalley et al.(2016) ERF4_col_a	0.684	0.702
ERF4 M06617_2.00	Arabidopsis thaliana	NHNNHNSCGCCGYCRHHDNN	NNHDDYGRCGGCGSNDNNDN	Dap-seq OMalley et al.(2016) ERF4_colamp_a	0.684	0.702
Q84J59_MAIZE M09717_2.00	Zea mays	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$BD1_01	0.683	0.638
ERF086 M06663_2.00	Arabidopsis thaliana	HHDYCKCCGCCGYHD	HDRCGGCGGMGRHDD	Dap-seq OMalley et al.(2016) PUCHI_col_a	0.679	0.660
ERF086 M06664_2.00	Arabidopsis thaliana	NNNNHDHCKCCGCCGYHDHHDHNNN	NNNDHDDHDRCGGCGGMGDHDNNNN	Dap-seq OMalley et al.(2016) PUCHI_colamp_a	0.679	0.660
ERF105 M01632_2.00	Arabidopsis thaliana	CGCCGGCM	KGCCGGCG	PBM Weirauch et al.(2014) pTH7233	0.678	0.723
ERF105 M06676_2.00	Arabidopsis thaliana	NHNNNNNNNNHNNHDBCGCCGCCR	YGGCGGCGVHDNNDNNNNNNNNDN	Dap-seq OMalley et al.(2016) ERF105_colamp_a	0.678	0.723
ERF105 M06677_2.00	Arabidopsis thaliana	HDSCGCCGCCRYHDH	DHDRYGGCGGCGSHD	Dap-seq OMalley et al.(2016) ERF105_col	0.678	0.723
For this family, TFs with SR scores > 0.677* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
OPUNC01G07600.1	AP2	139	190	PRFRGVRRRPWGKYAAEIRDPWRRVRVWLGTFDTAEEAAKVYDTAAIQLRGR

Links
Other AP2 family TFs
Other *Oryza punctata* TFs

551 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
RO3G_07919	Rhizopus oryzae	RO3G_07919	N
RO3G_17389	Rhizopus oryzae	RO3G_17389	N
RO3G_17348	Rhizopus oryzae	RO3G_17348	N
RO3G_17322	Rhizopus oryzae	RO3G_17322	N
RO3G_17221	Rhizopus oryzae	RO3G_17221	N
RO3G_16076	Rhizopus oryzae	RO3G_16076	N
RO3G_14908	Rhizopus oryzae	RO3G_14908	N
RO3G_14748	Rhizopus oryzae	RO3G_14748	N
RO3G_13707	Rhizopus oryzae	RO3G_13707	N
RO3G_13483	Rhizopus oryzae	RO3G_13483	N
RO3G_13265	Rhizopus oryzae	RO3G_13265	N
RO3G_12352	Rhizopus oryzae	RO3G_12352	N
RO3G_11990	Rhizopus oryzae	RO3G_11990	N
RO3G_10082	Rhizopus oryzae	RO3G_10082	N
RO3G_08729	Rhizopus oryzae	RO3G_08729	N
RO3G_00002	Rhizopus oryzae	RO3G_00002	N
RO3G_07318	Rhizopus oryzae	RO3G_07318	N
RO3G_06439	Rhizopus oryzae	RO3G_06439	N
RO3G_05692	Rhizopus oryzae	RO3G_05692	N
RO3G_05332	Rhizopus oryzae	RO3G_05332	N
RO3G_05129	Rhizopus oryzae	RO3G_05129	N
RO3G_05128	Rhizopus oryzae	RO3G_05128	N
RO3G_05090	Rhizopus oryzae	RO3G_05090	N
RO3G_04035	Rhizopus oryzae	RO3G_04035	N
RO3G_04027	Rhizopus oryzae	RO3G_04027	N
RO3G_03986	Rhizopus oryzae	RO3G_03986	N
RO3G_03722	Rhizopus oryzae	RO3G_03722	N
RO3G_02948	Rhizopus oryzae	RO3G_02948	N
RO3G_01112	Rhizopus oryzae	RO3G_01112	N
RO3G_00400	Rhizopus oryzae	RO3G_00400	N

OPUNC01G07600 (Oryza punctata) AP2

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

551 Related TFs

OPUNC01G07600 **(Oryza punctata)
AP2**