CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

OPUNC02G24070 *(Oryza punctata)* AP2
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00847 (AP2)	IPR001471	OPUNC02G24070	T003702_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
ERF2_TOBAC M09727_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF2_01	0.808	0.878
ERF1A M00848_2.00	Arabidopsis thaliana	NNNNRNN	NNYNNNN	PBM Franco-Zorrilla et al.(2014) ATERF1	0.770	0.898
ERF1A M00720_2.00	Arabidopsis thaliana	NMGCCRNCN	NGNYGGCKN	PBM Chang et al.(2013) pTH7202	0.770	0.898
ERF5_TOBAC M09729_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF4_02	0.757	0.837
A5JTT1_WHEAT M09700_2.00	Triticum aestivum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF3_01	0.754	0.939
ERF2 M01631_2.00	Arabidopsis thaliana	NNNGCCGNCN	NGNCGGCNNN	PBM Weirauch et al.(2014) pTH8113	0.753	0.878
ERF2 M06672_2.00	Arabidopsis thaliana	HHNHHNYHDYCGCCGCCRYND	HNRYGGCGGCGRHDRNDDNDD	Dap-seq OMalley et al.(2016) ERF2_col_a	0.753	0.878
ERF2 M06673_2.00	Arabidopsis thaliana	NNNNNNNHNNHDSMGCCGCCR	YGGCGGCKSHDNNDNNNNNNN	Dap-seq OMalley et al.(2016) ERF2_colamp_a	0.753	0.878
ERF5 M00721_2.00	Arabidopsis thaliana	NNNGSMRNMN	NKNYKSCNNN	PBM Chang et al.(2013) pTH7197	0.749	0.837
ERF5 M06674_2.00	Arabidopsis thaliana	YCDYCKCCGCCGYCD	HGRCGGCGGMGRHGR	Dap-seq OMalley et al.(2016) ERF5_col_a	0.749	0.837
ERF5 M06675_2.00	Arabidopsis thaliana	NHDBCGCCGCCRYHDNHDNNN	NNNHDNHDRYGGCGGCGVHDN	Dap-seq OMalley et al.(2016) ERF5_colamp_a	0.749	0.837
PK02330.1 M01095_2.00	Cannabis sativa	NNNGCCGBCN	NGVCGGCNNN	PBM Lambert et al.(2019) pTH10093	0.746	0.816
ERF113 M01629_2.00	Arabidopsis thaliana	NNGCCGHHNN	NNDDCGGCNN	PBM Weirauch et al.(2014) pTH8097	0.742	0.755
AT2G33710 M01613_2.00	Arabidopsis thaliana	NSMGCCGHMN	NKDCGGCKSN	PBM Weirauch et al.(2014) pTH7543	0.733	0.776
AT2G33710 M06606_2.00	Arabidopsis thaliana	DBCGCCGCCGYHDHHDNH	DNHDDHDRCGGCGGCGVH	Dap-seq OMalley et al.(2016) At2g33710_colamp_a	0.733	0.776
AT2G33710 M06607_2.00	Arabidopsis thaliana	NHDYCKCCGCCGYMD	HKRCGGCGGMGRHDN	Dap-seq OMalley et al.(2016) At2g33710_col	0.733	0.776
O65242_TOBAC M09730_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$TSI1_01	0.727	0.673
ERF1B M01619_2.00	Arabidopsis thaliana	NMGCCGCCRN	NYGGCGGCKN	PBM Weirauch et al.(2014) pTH8795	0.724	0.837
ERF1B M06626_2.00	Arabidopsis thaliana	NHNNHDYMGCCGCCRYHDNHDNNNNNNN	NNNNNNNHDNHDRYGGCGGCKRHDNNDN	Dap-seq OMalley et al.(2016) ERF1_col_a	0.724	0.837
ERF1B M06627_2.00	Arabidopsis thaliana	MGCCGCCD	HGGCGGCK	Dap-seq OMalley et al.(2016) ERF1_colamp_a	0.724	0.837
ERF1B M09703_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF1_Q2_01	0.724	0.837
ERF1B M09704_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF1_Q2	0.724	0.837
0100010458 M01644_2.00	Ostreococcus tauri	MGCCGSCR	YGSCGGCK	PBM Weirauch et al.(2014) pTH9447	0.723	0.755
ERF6 M01621_2.00	Arabidopsis thaliana	NNGCCGGCVN	NBGCCGGCNN	PBM Weirauch et al.(2014) pTH7228	0.721	0.755
ERF6 M06637_2.00	Arabidopsis thaliana	NHNHHDCCGCCGCCRYHDHHN	NDDHDRYGGCGGCGGHDDNDN	Dap-seq OMalley et al.(2016) ERF6_col	0.721	0.755
Q5Y836_TOBAC M09732_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF5_02	0.715	0.796
RAP2-12 M01046_2.00	Arabidopsis thaliana	RSMGBMNNNN	NNNNKVCKSY	PBM Sullivan et al.(2014) pTH7359	0.713	0.755
RAP2-12 M06588_2.00	Arabidopsis thaliana	NHDCCGCCGCCRHHDHNNNHN	NDNNNDHDDYGGCGGCGGHDN	Dap-seq OMalley et al.(2016) RAP212_col_a	0.713	0.755
ERF105 M01632_2.00	Arabidopsis thaliana	CGCCGGCM	KGCCGGCG	PBM Weirauch et al.(2014) pTH7233	0.713	0.735
ERF105 M06676_2.00	Arabidopsis thaliana	NHNNNNNNNNHNNHDBCGCCGCCR	YGGCGGCGVHDNNDNNNNNNNNDN	Dap-seq OMalley et al.(2016) ERF105_colamp_a	0.713	0.735
ERF105 M06677_2.00	Arabidopsis thaliana	HDSCGCCGCCRYHDH	DHDRYGGCGGCGSHD	Dap-seq OMalley et al.(2016) ERF105_col	0.713	0.735
ERF096 M01630_2.00	Arabidopsis thaliana	NVGCCGNCNN	NNGNCGGCBN	PBM Weirauch et al.(2014) pTH7909	0.712	0.755
RAP2-2 M00719_2.00	Arabidopsis thaliana	NNRBYGNN	NNCRVYNN	PBM Chang et al.(2013) pTH7227	0.707	0.714
CRF3 M01633_2.00	Arabidopsis thaliana	NNGCCRNNN	NNNYGGCNN	PBM Weirauch et al.(2014) pTH8110	0.707	0.714
LOC_Os08g36920 M01634_2.00	Oryza sativa	NNNGSCGHNN	NNDCGSCNNN	PBM Weirauch et al.(2014) pTH8596	0.706	0.735
ERF104 M06682_2.00	Arabidopsis thaliana	NNHHDYMDCCGCCGCCRYH	DRYGGCGGCGGHKRHDDNN	Dap-seq OMalley et al.(2016) ERF104_col_a	0.704	0.673
ERF104 M06683_2.00	Arabidopsis thaliana	BHDSCGCCGCCRYHD	HDRYGGCGGCGSHDV	Dap-seq OMalley et al.(2016) ERF104_colamp_a	0.704	0.673
ERF15 M00718_2.00	Arabidopsis thaliana	NGSCGSCB	VGSCGSCN	PBM Chang et al.(2013) pTH7336	0.702	0.776
ERF15 M06604_2.00	Arabidopsis thaliana	NNNHNNHDBMGCCGCCDY	RHGGCGGCKVHDNNDNNN	Dap-seq OMalley et al.(2016) ERF15_colamp_a	0.702	0.776
ERF15 M06605_2.00	Arabidopsis thaliana	NNYHDYMGCCGCCRY	RYGGCGGCKRHDRNN	Dap-seq OMalley et al.(2016) ERF15_col	0.702	0.776
EREBP1 M09708_2.00	Oryza sativa	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$EREBP1_01	0.699	0.694
ERF091 M06638_2.00	Arabidopsis thaliana	NNHNYHDCCGCCGCCRY	RYGGCGGCGGHDRNDNN	Dap-seq OMalley et al.(2016) AT4G18450_col_a	0.695	0.776
PK19363.1 M01100_2.00	Cannabis sativa	NMGCCGHMNN	NNKDCGGCKN	PBM Lambert et al.(2019) pTH10138	0.694	0.714
PK19363.1 M01643_2.00	Cannabis sativa	CGCCGYCD	HGRCGGCG	PBM Weirauch et al.(2014) pTH9609	0.694	0.714
ERF9 M06670_2.00	Arabidopsis thaliana	YCDCCGCCGYCDHHDYHDYHN	NDRHDRHDDHGRCGGCGGHGR	Dap-seq OMalley et al.(2016) ERF9_col_a	0.694	0.714
ERF9 M06671_2.00	Arabidopsis thaliana	NNHDSCGCCGYCRHWDN	NHWDYGRCGGCGSHDNN	Dap-seq OMalley et al.(2016) ERF9_colamp_a	0.694	0.714
ERF4_TOBAC M09728_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF3_02	0.692	0.714
ERF14 M01045_2.00	Arabidopsis thaliana	NVGCCGNCN	NGNCGGCBN	PBM Sullivan et al.(2014) pTH9793	0.687	0.755
CRF2 M01622_2.00	Arabidopsis thaliana	SCGCCGCC	GGCGGCGS	PBM Weirauch et al.(2014) pTH8680	0.686	0.653
CRF4 M01626_2.00	Arabidopsis thaliana	SCGCCGCC	GGCGGCGS	PBM Weirauch et al.(2014) pTH8261	0.685	0.694
CRF4 M06645_2.00	Arabidopsis thaliana	BMDCCGCCGCCRCHDHHDCYN	NRGHDDHDGYGGCGGCGGHKV	Dap-seq OMalley et al.(2016) CRF4_col_a	0.685	0.694
CRF4 M06646_2.00	Arabidopsis thaliana	YCDYCGCCGCCGYYD	HRRCGGCGGCGRHGR	Dap-seq OMalley et al.(2016) CRF4_colamp_a	0.685	0.694
Q7Y1W2_TOBAC M09735_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$CEF1_01	0.684	0.694
LEP M06661_2.00	Arabidopsis thaliana	NBCKCCGCCGYHDHHDYHNHH	DDNDRHDDHDRCGGCGGMGVN	Dap-seq OMalley et al.(2016) LEP_col_a	0.677	0.673
For this family, TFs with SR scores > 0.677* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
OPUNC02G24070.1	AP2	150	202	KHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFDSAEEAAVAYDRAAYRMRGS

Links
Other AP2 family TFs
Other *Oryza punctata* TFs

1682 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
ENSSHAG00000004351	Sarcophilus harrisii	ENSSHAG00000004351	N
ENSOARG00000005075	Ovis aries	ENSOARG00000005075	N
ZNF366	Oryctolagus cuniculus	ENSOCUG00000004571	N
ZNF366	Otolemur garnettii	ENSOGAG00000008393	N
ENSONIG00000015237	Oreochromis niloticus	ENSONIG00000015237	N
znf366	Oryzias latipes	ENSORLG00000003805	N
ENSPANG00000023914	Papio anubis	ENSPANG00000023914	N
ENSPFOG00000007607	Poecilia formosa	ENSPFOG00000007607	N
ENSPPYG00000015544	Pongo abelii	ENSPPYG00000015544	N
ENSPSIG00000014530	Pelodiscus sinensis	ENSPSIG00000014530	N
ZNF366	Pan troglodytes	ENSPTRG00000016969	N
ZNF366	Pteropus vampyrus	ENSPVAG00000010937	N
Zfp366	Rattus norvegicus	ENSRNOG00000017249	N
ZNF366	Sorex araneus	ENSSARG00000010412	N
ZNF366	Ornithorhynchus anatinus	ENSOANG00000015788	N
ZNF366	Sus scrofa	ENSSSCG00000016976	N
ENSSTOG00000029102	Ictidomys tridecemlineatus	ENSSTOG00000029102	N
ZNF366	Taeniopygia guttata	ENSTGUG00000005717	N
znf366	Tetraodon nigroviridis	ENSTNIG00000016682	N
znf366	Takifugu rubripes	ENSTRUG00000015639	N
ZNF366	Tursiops truncatus	ENSTTRG00000011858	N
ENSXMAG00000016095	Xiphophorus maculatus	ENSXMAG00000016095	N
Cmyd_10009121	Chelonia mydas	Cmyd_10009121	N
ENSP00000313158	Macaca fascicularis	ENSP00000313158	N
Myotis_brandtii_ZNF366_10035915	Myotis brandtii	Myotis_brandtii_ZNF366_10035915	N
Ogr16419	Ophisaurus gracilis	Ogr16419	N
Pvit_17551	Pogona vitticeps	Pvit_17551	N
znf366	Xenopus tropicalis	XB-GENE-6464910	N
ZNF366	Homo sapiens	ENSG00000178175	N
ENSAMEG00000007185	Ailuropoda melanoleuca	ENSAMEG00000007185	N
ENSAMXG00000006287	Astyanax mexicanus	ENSAMXG00000006287	N
ZNF366	Bos taurus	ENSBTAG00000020601	N
ZNF366	Canis familiaris	ENSCAFG00000007986	N
ZNF366	Callithrix jacchus	ENSCJAG00000016387	N
ZNF366	Cavia porcellus	ENSCPOG00000007542	N
ENSCSAG00000015620	Chlorocebus sabaeus	ENSCSAG00000015620	N
znf366	Danio rerio	ENSDARG00000040116	N
ZNF366	Dasypus novemcinctus	ENSDNOG00000046166	N
Zfp366	Dipodomys ordii	ENSDORG00000000338	N
ZNF366	Equus caballus	ENSECAG00000006723	N
ENSFALG00000010297	Ficedula albicollis	ENSFALG00000010297	N
ZNF366	Felis catus	ENSFCAG00000005456	N
ZNF366	Anolis carolinensis	ENSACAG00000009713	N
znf366	Gasterosteus aculeatus	ENSGACG00000006566	N
ZNF366	Gallus gallus	ENSGALG00000015008	N
ZNF366	Gorilla gorilla	ENSGGOG00000004981	N
ENSGMOG00000007538	Gadus morhua	ENSGMOG00000007538	N
ENSLACG00000013704	Latimeria chalumnae	ENSLACG00000013704	N
ZNF366	Loxodonta africana	ENSLAFG00000030138	N
ENSLOCG00000011104	Lepisosteus oculatus	ENSLOCG00000011104	N
ENSMEUG00000015869	Macropus eugenii	ENSMEUG00000015869	N
ZNF366	Monodelphis domestica	ENSMODG00000001702	N
ENSMPUG00000014399	Mustela putorius furo	ENSMPUG00000014399	N
Zfp366	Mus musculus	ENSMUSG00000050919	N
ENSNLEG00000004555	Nomascus leucogenys	ENSNLEG00000004555	N

OPUNC02G24070 (Oryza punctata) AP2

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1682 Related TFs

OPUNC02G24070 **(Oryza punctata)
AP2**