CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400014157
(
Solanum tuberosum
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
PGSC0003DMG400014157
T004409_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400036707
AP2
25
77
SKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGL
Links
Other
AP2
family TFs
Other
Solanum tuberosum
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc01289
Meloidogyne incognita
Minc01289
N
Minc01631
Meloidogyne incognita
Minc01631
N
Minc02595
Meloidogyne incognita
Minc02595
N
Minc02620
Meloidogyne incognita
Minc02620
N
Minc06167
Meloidogyne incognita
Minc06167
N
augustus_masked-nMf.1.1.scaf27170-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf27170-processed-gene-0.0
N
maker-nMf.1.1.scaf18710-augustus-gene-0.3
Meloidogyne floridensis
maker-nMf.1.1.scaf18710-augustus-gene-0.3
N
MhA1_Contig1131.frz3.gene4
Meloidogyne hapla
MhA1_Contig1131.frz3.gene4
N
MhA1_Contig1253.frz3.gene6
Meloidogyne hapla
MhA1_Contig1253.frz3.gene6
N