POPTR_0001s10540 (Populus trichocarpa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 POPTR_0001s10540 T004570_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.770 0.840
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.763 0.840
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.763 0.840
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0001s10540.1 AP2 103 154

Links

Other AP2 family TFs
Other Populus trichocarpa TFs

438 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACOM033597 Anopheles coluzzii ACOM033597 N 0.000
PPAI009297 Phlebotomus papatasi PPAI009297 N 0.000
ASTEI01161 Anopheles stephensi ASTEI01161 N 0.000
ASIS018654 Anopheles sinensis ASIS018654 N 0.000
AQUA005761 Anopheles quadriannulatus AQUA005761 N 0.000
AMIN005859 Anopheles minimus AMIN005859 N 0.000
AMEM008262 Anopheles merus AMEM008262 N 0.000
AMEC004142 Anopheles melas AMEC004142 N 0.000
AMAM021559 Anopheles maculatus AMAM021559 N 0.000
AFUN011454 Anopheles funestus AFUN011454 N 0.000
AFAF006398 Anopheles farauti AFAF006398 N 0.000
AEPI010450 Anopheles epiroticus AEPI010450 N 0.000
ADIR000952 Anopheles dirus ADIR000952 N 0.000
ACUA019091 Anopheles culicifacies ACUA019091 N 0.000
AAEL011202 Aedes aegypti AAEL011202 N 0.000
AATE014395 Anopheles atroparvus AATE014395 N 0.000
AARA010375 Anopheles arabiensis AARA010375 N 0.000
AALB010881 Anopheles albimanus AALB010881 N 0.000
Hsal_01592--XP_395909.2_APIME Harpegnathos saltator Hsal_01592--XP_395909.2_APIME N 0.000
Cflo_03961--XP_395909.2_APIME Camponotus floridanus Cflo_03961--XP_395909.2_APIME N 0.000
RPRC002411 Rhodnius prolixus RPRC002411 N 0.000
KGM_07096 Danaus plexippus KGM_07096 N 0.000
GB55103 Apis mellifera GB55103 N 0.000
BGIBMGA012568 Bombyx mori BGIBMGA012568 N 0.000
AGAP000682 Anopheles gambiae AGAP000682 N 0.000
ADAC004518 Anopheles darlingi ADAC004518 N 0.000
ACYPI008046 Acyrthosiphon pisum ACYPI008046 N 0.000
ACEP12320 Atta cephalotes ACEP12320 N 0.000