POPTR_0013s10420 (Populus trichocarpa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 POPTR_0013s10420 T004715_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF019
M01092_2.00 		Arabidopsis thaliana
CRCCGRCV
BGYCGGYG		 PBM
Lambert et al.(2019)
pTH11534 		0.707 0.740
ERF019
M06571_2.00 		Arabidopsis thaliana
HDYCACCGACAHNNN
NNNDTGTCGGTGRHD		 Dap-seq
OMalley et al.(2016)
At1g22810_colamp_a 		0.707 0.740
ERF019
M06572_2.00 		Arabidopsis thaliana
DYCACCGHCRHHDYC
GRHDDYGDCGGTGRH		 Dap-seq
OMalley et al.(2016)
At1g22810_col 		0.707 0.740
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0013s10420.1 AP2 20 71

Links

Other AP2 family TFs
Other Populus trichocarpa TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TEQG_01966 Trichophyton equinum TEQG_01966 N
PABG_04700 Paracoccidioides brasiliensis PABG_04700 N
PCH_Pc13g03900 Penicillium rubens PCH_Pc13g03900 N
PDE_04420 Penicillium oxalicum PDE_04420 N
PDIP_84470 Penicillium digitatum PDIP_84470 N
PEX1_099230 Penicillium expansum PEX1_099230 N
PITC_035170 Penicillium italicum PITC_035170 N
PMAA_071030 Talaromyces marneffei PMAA_071030 N
PVAR5_1693 Byssochlamys spectabilis PVAR5_1693 N
MGYG_02151 Microsporum gypseum MGYG_02151 N
TESG_01107 Trichophyton tonsurans TESG_01107 N
TRV_07120 Trichophyton verrucosum TRV_07120 N
TSTA_091450 Talaromyces stipitatus TSTA_091450 N
U727_00431070561 Penicillium solitum U727_00431070561 N
UREG_00787 Uncinocarpus reesii UREG_00787 N
fgenesh1_pg.00772_#_76 Aspergillus carbonarius fgenesh1_pg.00772_#_76 N
Pc13g03900 Penicillium chrysogenum Pc13g03900 N
PMAA_071030 Penicillium marneffei PMAA_071030 N
ATEG_09704 Aspergillus terreus CADATEAG00004438 N
MCYG_04483 Microsporum canis MCYG_04483 N
ARB_04934 Arthroderma benhamiae ARB_04934 N
BDDG_04882 Blastomyces dermatitidis BDDG_04882 N
ACLA_080560 Aspergillus clavatus CADACLAG00007888 N
CADAFLAG00005961 Aspergillus flavus CADAFLAG00005961 N
AFUA_2G08700 Aspergillus fumigatus CADAFUAG00004658 N
CADANGAG00009847 Aspergillus niger CADANGAG00009847 N
ANIA_06124 Aspergillus nidulans CADANIAG00006888 N
CIMG_00825 Coccidioides immitis CIMG_00825 N
NFIA_084300 Neosartorya fischeri CADNFIAG00008100 N
EPUS_04289 Endocarpon pusillum EPUS_04289 N
EURHEDRAFT_464263 Aspergillus ruber EURHEDRAFT_464263 N
H101_00104 Trichophyton interdigitale H101_00104 N
H102_05676 Trichophyton rubrum H102_05676 N
H105_05716 Trichophyton soudanense H105_05716 N
HCBG_04552 Histoplasma capsulatum HCBG_04552 N
MCYG_04483 Arthroderma otae MCYG_04483 N