Solyc12g009490.1 (Solanum lycopersicum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Solyc12g009490.1 T005548_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.800 0.922
ERF003
M06667_2.00 		Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN
NDRHDDHKRCGGYGGHGRH		 Dap-seq
OMalley et al.(2016)
ESE3_col_a 		0.744 0.824
ERF003
M06668_2.00 		Arabidopsis thaliana
HDYCKCCGCCGYHDH
DHDRCGGCGGMGRHD		 Dap-seq
OMalley et al.(2016)
ESE3_colamp_a 		0.744 0.824
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc12g009490.1.1 AP2 5 56

Links

Other AP2 family TFs
Other Solanum lycopersicum TFs

311 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OS01G0195801 Oryza sativa OS01G0195801 N
OMERI01G18730 Oryza meridionalis OMERI01G18730 N
ONIVA01G07080 Oryza nivara ONIVA01G07080 N
ONIVA01G07190 Oryza nivara ONIVA01G07190 N
ONIVA01G22870 Oryza nivara ONIVA01G22870 N
OPUNC01G20610 Oryza punctata OPUNC01G20610 N
ORGLA01G0058200 Oryza glaberrima ORGLA01G0058200 N
ORGLA01G0397100 Oryza glaberrima ORGLA01G0397100 N
ORGLA08G0199700 Oryza glaberrima ORGLA08G0199700 N
ORUFI01G06710 Oryza rufipogon ORUFI01G06710 N
ORUFI01G22920 Oryza rufipogon ORUFI01G22920 N
OMERI01G06310 Oryza meridionalis OMERI01G06310 N
OS01G0196300 Oryza sativa OS01G0196300 N
OS01G0575200 Oryza sativa OS01G0575200 N
Sb03g002910 Sorghum bicolor Sb03g002910 N
Sb03g025860 Sorghum bicolor Sb03g025860 N
Si001328m.g Setaria italica Si001328m.g N
Si001494m.g Setaria italica Si001494m.g N
TRAES3BF047700010CFD_g Triticum aestivum TRAES3BF047700010CFD_g N
Pavir.Ea00369 Panicum virgatum Pavir.Ea00369 N
Pavir.Ea01566 Panicum virgatum Pavir.Ea01566 N
MLOC_70258 Hordeum vulgare MLOC_70258 N
BGIOSGA002943 Oryza indica BGIOSGA002943 N
BGIOSGA003814 Oryza indica BGIOSGA003814 N
BRADI2G41670 Brachypodium distachyon BRADI2G41670 N
GRMZM2G333582 Zea mays GRMZM2G333582 N
GRMZM2G397755 Zea mays GRMZM2G397755 N
GRMZM2G463133 Zea mays GRMZM2G463133 N
GRMZM5G849600 Zea mays GRMZM5G849600 N
LPERR01G05820 Leersia perrieri LPERR01G05820 N
LPERR01G17450 Leersia perrieri LPERR01G17450 N
BGIOSGA002940 Oryza indica BGIOSGA002940 N
OB01G16120 Oryza brachyantha OB01G16120 N
OB01G30040 Oryza brachyantha OB01G30040 N
OBART01G06120 Oryza barthii OBART01G06120 N
OBART01G06170 Oryza barthii OBART01G06170 N
OBART01G20310 Oryza barthii OBART01G20310 N
OGLUM01G06690 Oryza glumaepatula OGLUM01G06690 N
OGLUM01G06730 Oryza glumaepatula OGLUM01G06730 N
OGLUM01G23890 Oryza glumaepatula OGLUM01G23890 N
OLONG_006433 Oryza longistaminata OLONG_006433 N