cassava11389.m1 (Manihot esculenta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 cassava11389.m1 T006796_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.803 0.922
ERF003
M06667_2.00 		Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN
NDRHDDHKRCGGYGGHGRH		 Dap-seq
OMalley et al.(2016)
ESE3_col_a 		0.744 0.843
ERF003
M06668_2.00 		Arabidopsis thaliana
HDYCKCCGCCGYHDH
DHDRCGGCGGMGRHD		 Dap-seq
OMalley et al.(2016)
ESE3_colamp_a 		0.744 0.843
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava11389.m1 AP2 5 56

Links

Other AP2 family TFs
Other Manihot esculenta TFs

297 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
qa-1F Neurospora crassa NCU06028 D
PTT_06800 Pyrenophora teres PTT_06800 I
e_gw1.3.120.1 Cryphonectria parasitica e_gw1.3.120.1 I
fgenesh1_pg.C_scaffold_40000014 Mycosphaerella fijiensis fgenesh1_pg.C_scaffold_40000014 I
estExt_Genewise1Plus.C_50594 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_50594 I
estExt_Genewise1.C_80993 Neurospora discreta estExt_Genewise1.C_80993 I
W97_04550 Coniosporium apollinis W97_04550 I
VDBG_08512 Verticillium alfalfae VDBG_08512 I
VDAG_08177 Verticillium dahliae VDAG_08177 I
UCRNP2_4108 Neofusicoccum parvum UCRNP2_4108 I
THITE_2116895 Thielavia terrestris THITE_2116895 I
SPBR_06572 Sporothrix brasiliensis SPBR_06572 I
SMAC_07407 Sordaria macrospora SMAC_07407 I
SETTUDRAFT_140992 Setosphaeria turcica SETTUDRAFT_140992 I
PVAR5_3766 Byssochlamys spectabilis PVAR5_3766 I
PV09_01109 Verruconis gallopava PV09_01109 I
MPH_01982 Macrophomina phaseolina MPH_01982 I
VDBG_08512 Verticillium albo atrum VDBG_08512 I
COCCADRAFT_5667 Bipolaris zeicola COCCADRAFT_5667 I
COCVIDRAFT_27956 Bipolaris victoriae COCVIDRAFT_27956 I
F503_06755 Ophiostoma piceae uamh F503_06755 I
GGTG_00383 Gaeumannomyces graminis GGTG_00383 I
GLRG_07125 Colletotrichum graminicola GLRG_07125 I
MAPG_07478 Magnaporthe poae MAPG_07478 I
MGG_07777 Magnaporthe oryzae MGG_07777 I
MYCFIDRAFT_170117 Pseudocercospora fijiensis MYCFIDRAFT_170117 I
MYCTH_2067244 Myceliophthora thermophila MYCTH_2067244 I
NEUTE1DRAFT_147986 Neurospora tetrasperma NEUTE1DRAFT_147986 I
OIDMADRAFT_52514 Oidiodendron maius OIDMADRAFT_52514 I
PFICI_15081 Pestalotiopsis fici PFICI_15081 I
PODANS_5_5100 Podospora anserina PODANS_5_5100 I
SNOG_07941 Stagonospora nodorum SNOG_07941 N
SNOG_07941 Phaeosphaeria nodorum SNOG_07941 N