cassava20838.m1 (Manihot esculenta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 cassava20838.m1 T006841_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
abi4
M02648_2.00 		Zea mays
CGSYGCYBYB
VRVRGCRSCG		 SELEX
Mathelier et al.(2014)
MA0123.1 		0.783 0.900
abi4
M09706_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABI4_01 		0.783 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava20838.m1 AP2 58 109

Links

Other AP2 family TFs
Other Manihot esculenta TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSPATT00023071001 Paramecium tetraurelia GSPATT00023071001 N
GSPATT00024104001 Paramecium tetraurelia GSPATT00024104001 N
GSPATT00026473001 Paramecium tetraurelia GSPATT00026473001 N
GSPATT00030532001 Paramecium tetraurelia GSPATT00030532001 N
TTHERM_00131150 Tetrahymena thermophila TTHERM_00131150 N
TTHERM_00627230 Tetrahymena thermophila TTHERM_00627230 N