CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf021167m
(
Mimulus guttatus
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
mgf021167m
T007407_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RAP2-4
M01612_2.00
Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN
PBM
Weirauch et al.(2014)
pTH8092
0.770
0.840
ERF055
M06577_2.00
Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN
Dap-seq
OMalley et al.(2016)
At1g36060_col_a
0.763
0.840
ERF055
M06578_2.00
Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN
Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a
0.763
0.840
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf021167m
AP2
79
130
KLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDTAEAAAYAYDRAAYKLRGE
Links
Other
AP2
family TFs
Other
Mimulus guttatus
TFs
438 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CAMTA5
Arabidopsis thaliana
AT4G16150
D
0.000
Q2WEL1_ORYSA
Oryza sativa
Q2WEL1_ORYSA
D
0.000
Gorai.004G075100
Gossypium raimondii
Gorai.004G075100
I
0.000
Ca_02997
Cicer arietinum
Ca_02997
I
0.000
Cla009415
Citrullus lanatus
Cla009415
I
0.000
cassava40488.m1
Manihot esculenta
cassava40488.m1
I
0.000
Cucsa.325250
Cucumis sativus
Cucsa.325250
I
0.000
mgf012030m
Mimulus guttatus
mgf012030m
I
0.000
Aquca_003_00568
Aquilegia coerulea
Aquca_003_00568
I
0.000
Bostr.30275s0060
Boechera stricta
Bostr.30275s0060
I
0.000
Cagra.0053s0009
Capsella grandiflora
Cagra.0053s0009
I
0.000
Carubv10004090m.g
Capsella rubella
Carubv10004090m.g
I
0.000
Ciclev10004273m.g
Citrus clementina
Ciclev10004273m.g
I
0.000
Eucgr.H04035
Eucalyptus grandis
Eucgr.H04035
I
0.000
evm.TU.supercontig_929.1
Carica papaya
evm.TU.supercontig_929.1
I
0.000
Traes_2BS_1A9DB766A
Triticum aestivum
Traes_2BS_1A9DB766A
I
0.000
Gorai.005G065700
Gossypium raimondii
Gorai.005G065700
I
0.000
Gorai.006G079000
Gossypium raimondii
Gorai.006G079000
I
0.000
Gorai.011G198600
Gossypium raimondii
Gorai.011G198600
I
0.000
Lus10037738.g
Linum usitatissimum
Lus10037738.g
I
0.000
MDP0000164873
Malus domestica
MDP0000164873
I
0.000
MDP0000167705
Malus domestica
MDP0000167705
I
0.000
MDP0000233860
Malus domestica
MDP0000233860
I
0.000
orange1.1g002476m.g
Citrus sinensis
orange1.1g002476m.g
I
0.000
Pavir.Ba00948
Panicum virgatum
Pavir.Ba00948
I
0.000
Pavir.J11066
Panicum virgatum
Pavir.J11066
I
0.000
Thhalv10024342m.g
Eutrema salsugineum
Thhalv10024342m.g
I
0.000
PK20811.1
Cannabis sativa
PK20811.1
I
0.000
chr4.CM0429.140.nd
Lotus japonicus
chr4.CM0429.140.nd
I
0.000
OLONG_014480
Oryza longistaminata
OLONG_014480
I
0.000
Bo8g043280
Brassica oleracea
Bo8g043280
I
0.000
Bra038040
Brassica rapa
Bra038040
I
0.000
fgenesh1_pg.C_scaffold_7002321
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_7002321
I
0.000
GLYMA07G37090
Glycine max
GLYMA07G37090
I
0.000
GLYMA09G04310
Glycine max
GLYMA09G04310
I
0.000
GLYMA15G15350
Glycine max
GLYMA15G15350
I
0.000
GLYMA17G03510
Glycine max
GLYMA17G03510
I
0.000
GRMZM2G032336
Zea mays
GRMZM2G032336
I
0.000
GSMUA_Achr8G10490_001
Musa acuminata
GSMUA_Achr8G10490_001
I
0.000
MTR_2g034650
Medicago truncatula
MTR_2g034650
I
0.000
MTR_4g121840
Medicago truncatula
MTR_4g121840
I
0.000
OB07G20740
Oryza brachyantha
OB07G20740
I
0.000
OGLUM07G13800
Oryza glumaepatula
OGLUM07G13800
I
0.000
Traes_2DS_119508A0E
Triticum aestivum
Traes_2DS_119508A0E
I
0.000
ONIVA07G13300
Oryza nivara
ONIVA07G13300
I
0.000
OPUNC07G13630
Oryza punctata
OPUNC07G13630
I
0.000
ORUFI07G15090
Oryza rufipogon
ORUFI07G15090
I
0.000
OS07G0490200
Oryza sativa
OS07G0490200
I
0.000
POPTR_0008s10730
Populus trichocarpa
POPTR_0008s10730
I
0.000
POPTR_0010s15160
Populus trichocarpa
POPTR_0010s15160
I
0.000
PRUPE_ppa001493mg
Prunus persica
PRUPE_ppa001493mg
I
0.000
Sb02g033620
Sorghum bicolor
Sb02g033620
I
0.000
Si028862m.g
Setaria italica
Si028862m.g
I
0.000
Solyc01g060170.2
Solanum lycopersicum
Solyc01g060170.2
I
0.000
TCM_021327
Theobroma cacao
TCM_021327
I
0.000
Traes_2AS_4C4190DEB
Triticum aestivum
Traes_2AS_4C4190DEB
I
0.000