Cagra.1192s0001 (Capsella grandiflora)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cagra.1192s0001 T007726_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF014
M06581_2.00 		Arabidopsis thaliana
YCDYCDCCACCGHCD
HGDCGGTGGHGRHGR		 Dap-seq
OMalley et al.(2016)
AT1G44830_col_a 		0.796 1.000
ERF012
M06570_2.00 		Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC
GDCGGTGGHDDHDDNDNNDN		 Dap-seq
OMalley et al.(2016)
DREB26_col_a 		0.782 0.960
ERF013
M06601_2.00 		Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN
NNNNNNDNHDDTGDCGGTGRH		 Dap-seq
OMalley et al.(2016)
At1g77640_col_a 		0.763 0.960
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.1192s0001.1.p AP2 37 88

Links

Other AP2 family TFs
Other Capsella grandiflora TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_06921 Capronia coronata A1O1_06921 N 0.000
A1O3_04094 Capronia epimyces A1O3_04094 N 0.000
A1O5_12156 Cladophialophora psammophila A1O5_12156 N 0.000
A1O7_02526 Cladophialophora yegresii A1O7_02526 N 0.000
A1O9_06953 Exophiala aquamarina A1O9_06953 N 0.000
G647_09037 Cladophialophora carrionii G647_09037 N 0.000
HMPREF1120_04939 Exophiala dermatitidis HMPREF1120_04939 N 0.000
PV04_02683 Capronia semiimmersa PV04_02683 N 0.000
PV05_07578 Exophiala xenobiotica PV05_07578 N 0.000
PV07_01628 Cladophialophora immunda PV07_01628 N 0.000
PV08_03361 Exophiala spinifera PV08_03361 N 0.000
PV10_03576 Exophiala mesophila PV10_03576 N 0.000
Z517_04420 Fonsecaea pedrosoi Z517_04420 N 0.000
Z518_02855 Rhinocladiella mackenziei Z518_02855 N 0.000
Z519_09269 Cladophialophora bantiana Z519_09269 N 0.000