Ciclev10024063m.g (Citrus clementina)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Ciclev10024063m.g T008045_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF021
M06593_2.00 		Arabidopsis thaliana
HNYCDYCDYCDYCRCCGHCD
HGDCGGYGRHGRHGRHGRND		 Dap-seq
OMalley et al.(2016)
AT1G71450_col_a 		0.737 0.860
ERF021
M06594_2.00 		Arabidopsis thaliana
NHNNCRCCGHCDH
DHGDCGGYGNNDN		 Dap-seq
OMalley et al.(2016)
AT1G71450_colamp_a 		0.737 0.860
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10024063m AP2 11 62

Links

Other AP2 family TFs
Other Citrus clementina TFs

82 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SNOG_04842 Stagonospora nodorum SNOG_04842 N 0.000
COCC4DRAFT_76975 Bipolaris maydis COCC4DRAFT_76975 N 0.000
COCCADRAFT_107226 Bipolaris zeicola COCCADRAFT_107226 N 0.000
COCMIDRAFT_106375 Bipolaris oryzae COCMIDRAFT_106375 N 0.000
COCSADRAFT_272980 Bipolaris sorokiniana COCSADRAFT_272980 N 0.000
COCVIDRAFT_14231 Bipolaris victoriae COCVIDRAFT_14231 N 0.000
LEMA_P047940.1 Leptosphaeria maculans LEMA_P047940.1 N 0.000
PTRG_03911 Pyrenophora triticirepentis PTRG_03911 N 0.000
SETTUDRAFT_134164 Setosphaeria turcica SETTUDRAFT_134164 N 0.000
SNOG_04842 Phaeosphaeria nodorum SNOG_04842 N 0.000
AB03766.1 Alternaria brassicicola AB03766.1 N 0.000