evm.TU.supercontig_44.73 (Carica papaya)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 evm.TU.supercontig_44.73 T008305_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF098
M01618_2.00 		Arabidopsis thaliana
NNGCCGNC
GNCGGCNN		 PBM
Weirauch et al.(2014)
pTH8259 		0.784 0.918
ERF13
M01615_2.00 		Arabidopsis thaliana
VGCCGSCD
HGSCGGCB		 PBM
Weirauch et al.(2014)
pTH7283 		0.752 0.796
ERF13
M06612_2.00 		Arabidopsis thaliana
NHDBMGCCGCCDYHD
HDRHGGCGGCKVHDN		 Dap-seq
OMalley et al.(2016)
ERF13_colamp_a 		0.752 0.796
ERF13
M06613_2.00 		Arabidopsis thaliana
HDBMGCCGCCDYHDN
NHDRHGGCGGCKVHD		 Dap-seq
OMalley et al.(2016)
ERF13_col_b 		0.752 0.796
ERF14
M01045_2.00 		Arabidopsis thaliana
NVGCCGNCN
NGNCGGCBN		 PBM
Sullivan et al.(2014)
pTH9793 		0.713 0.714
ERF095
M06624_2.00 		Arabidopsis thaliana
YCDCCGCCGCCRYHD
HDRYGGCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ESE1_col_a 		0.695 0.714
ERF095
M06625_2.00 		Arabidopsis thaliana
YHNYYDYHDCCGCCGCCDYH
DRHGGCGGCGGHDRHRRNDR		 Dap-seq
OMalley et al.(2016)
ESE1_colamp_a 		0.695 0.714
ERF1A
M00848_2.00 		Arabidopsis thaliana
NNNNRNN
NNYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ATERF1 		0.690 0.755
ERF1A
M00720_2.00 		Arabidopsis thaliana
NMGCCRNCN
NGNYGGCKN		 PBM
Chang et al.(2013)
pTH7202 		0.690 0.755
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_44.73 AP2 20 72

Links

Other AP2 family TFs
Other Carica papaya TFs

423 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PTRG_04376 Pyrenophora triticirepentis PTRG_04376 N
AB03935.1 Alternaria brassicicola AB03935.1 N
AB00597.1 Alternaria brassicicola AB00597.1 N
fgenesh1_pg.C_scaffold_3000212 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_3000212 N
fgenesh1_pg.C_scaffold_13000086 Cochliobolus heterostrophus C5 fgenesh1_pg.C_scaffold_13000086 N
estExt_Genewise1Plus.C_20945 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_20945 N
SNOG_08725 Phaeosphaeria nodorum SNOG_08725 N
SETTUDRAFT_161746 Setosphaeria turcica SETTUDRAFT_161746 N
SETTUDRAFT_135369 Setosphaeria turcica SETTUDRAFT_135369 N
PTT_14925 Pyrenophora teres PTT_14925 N
PTT_01276 Pyrenophora teres PTT_01276 N
PTRG_08828 Pyrenophora triticirepentis PTRG_08828 N
SNOG_08725 Stagonospora nodorum SNOG_08725 N
LEMA_P046620.1 Leptosphaeria maculans LEMA_P046620.1 N
COCVIDRAFT_26374 Bipolaris victoriae COCVIDRAFT_26374 N
COCVIDRAFT_12967 Bipolaris victoriae COCVIDRAFT_12967 N
COCSADRAFT_40583 Bipolaris sorokiniana COCSADRAFT_40583 N
COCSADRAFT_155567 Bipolaris sorokiniana COCSADRAFT_155567 N
COCMIDRAFT_82835 Bipolaris oryzae COCMIDRAFT_82835 N
COCMIDRAFT_21935 Bipolaris oryzae COCMIDRAFT_21935 N
COCCADRAFT_99387 Bipolaris zeicola COCCADRAFT_99387 N
COCCADRAFT_3377 Bipolaris zeicola COCCADRAFT_3377 N
COCC4DRAFT_124149 Bipolaris maydis COCC4DRAFT_124149 N