Gorai.003G162700 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.003G162700 T008509_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.691 0.820
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.691 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.003G162700.1 AP2 39 90

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_05578 Aegilops tauschii F775_05578 N
F775_20352 Aegilops tauschii F775_20352 N
Traes_1BS_566CEE7F6 Triticum aestivum Traes_1BS_566CEE7F6 N
Traes_5DS_9F4A5AE9F Triticum aestivum Traes_5DS_9F4A5AE9F N
Traes_6AS_B211B0425 Triticum aestivum Traes_6AS_B211B0425 N
Traes_6BS_A303CDF0B Triticum aestivum Traes_6BS_A303CDF0B N
Traes_6DS_2ED8299A11 Triticum aestivum Traes_6DS_2ED8299A11 N
Traes_6DS_3FC2ADA87 Triticum aestivum Traes_6DS_3FC2ADA87 N
Traes_6DS_9E1F83202 Triticum aestivum Traes_6DS_9E1F83202 N
TRIUR3_00260 Triticum urartu TRIUR3_00260 N
TRIUR3_13043 Triticum urartu TRIUR3_13043 N
TRIUR3_31814 Triticum urartu TRIUR3_31814 N