Lus10011730.g (Linum usitatissimum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Lus10011730.g T008778_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10011730 AP2 274 331

Links

Other AP2 family TFs
Other Linum usitatissimum TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.353040 Cucumis sativus Cucsa.353040 I 0.846
evm.TU.supercontig_224.4 Carica papaya evm.TU.supercontig_224.4 N 0.691
evm.TU.supercontig_99.39 Carica papaya evm.TU.supercontig_99.39 N 0.815
evm.TU.supercontig_129.70 Carica papaya evm.TU.supercontig_129.70 N 0.896
Eucgr.A02341 Eucalyptus grandis Eucgr.A02341 N 0.703
Ciclev10005012m.g Citrus clementina Ciclev10005012m.g N 0.691
Carubv10023272m.g Capsella rubella Carubv10023272m.g N 0.693
Cagra.0914s0005 Capsella grandiflora Cagra.0914s0005 N 0.691
Bostr.11568s0008 Boechera stricta Bostr.11568s0008 N 0.693
Aquca_009_00241 Aquilegia coerulea Aquca_009_00241 N 0.695
mgf019897m Mimulus guttatus mgf019897m N 0.696
mgf017600m Mimulus guttatus mgf017600m N 0.705
Cucsa.338170 Cucumis sativus Cucsa.338170 N 0.695
cassava421.valid.m1 Manihot esculenta cassava421.valid.m1 N 0.693
cassava19560.m1 Manihot esculenta cassava19560.m1 N 0.702
30170.m013669 Ricinus communis 30170.m013669 N 0.844
30006.m000282 Ricinus communis 30006.m000282 N 0.693
Cla022214 Citrullus lanatus Cla022214 N 0.720
Ca_07237 Cicer arietinum Ca_07237 N 0.691
VIT_08s0007g08580 Vitis vinifera VIT_08s0007g08580 N 0.693
BBM Vitis vinifera VIT_04s0023g00950 N 0.815
Pavir.Cb01456 Panicum virgatum Pavir.Cb01456 N 0.696
PDK_20s1310831g004 Phoenix dactylifera PDK_20s1310831g004 N 0.755
LjSGA_012098.1 Lotus japonicus LjSGA_012098.1 N 0.709
chr3.CM0452.130.nd Lotus japonicus chr3.CM0452.130.nd N 0.709
PK18855.1 Cannabis sativa PK18855.1 N 0.705
PK15670.1 Cannabis sativa PK15670.1 N 0.791
PK12273.1 Cannabis sativa PK12273.1 N 0.691
Thhalv10016812m.g Eutrema salsugineum Thhalv10016812m.g N 0.691
SapurV1A.3066s0020 Salix purpurea SapurV1A.3066s0020 N 0.691
SapurV1A.0037s0030 Salix purpurea SapurV1A.0037s0030 N 0.693
TRIUR3_07433 Triticum urartu TRIUR3_07433 N 0.698
Pavir.Ca01410 Panicum virgatum Pavir.Ca01410 N 0.696
orange1.1g018292m.g Citrus sinensis orange1.1g018292m.g N 0.691
MDP0000803527 Malus domestica MDP0000803527 N 0.712
MDP0000314518 Malus domestica MDP0000314518 N 0.693
Lus10040140.g Linum usitatissimum Lus10040140.g N 0.693
Lus10039650.g Linum usitatissimum Lus10039650.g N 0.915
Lus10000965.g Linum usitatissimum Lus10000965.g N 0.693
Gorai.003G091500 Gossypium raimondii Gorai.003G091500 N 0.691
gene02470-v1.0-hybrid Fragaria vesca gene02470-v1.0-hybrid N 0.693
fgenesh2_kg.4__2311__AT2G41710.2 Arabidopsis lyrata fgenesh2_kg.4__2311__AT2G41710.2 N 0.691
OB03G42600 Oryza brachyantha OB03G42600 N 0.907
MTR_7g091390 Medicago truncatula MTR_7g091390 N 0.693
MLOC_7325 Hordeum vulgare MLOC_7325 N 0.696
LPERR05G11930 Leersia perrieri LPERR05G11930 N 0.698
GRMZM2G146688 Zea mays GRMZM2G146688 N 0.844
GRMZM2G013657 Zea mays GRMZM2G013657 N 0.698
GLYMA19G31960 Glycine max GLYMA19G31960 N 0.691
GLYMA03G29240 Glycine max GLYMA03G29240 N 0.691
GLYMA02G33090 Glycine max GLYMA02G33090 N 0.684
OB05G22940 Oryza brachyantha OB05G22940 N 0.698
F775_10869 Aegilops tauschii F775_10869 N 0.698
BRADI3G59300 Brachypodium distachyon BRADI3G59300 N 0.734
BRADI2G26987 Brachypodium distachyon BRADI2G26987 N 0.698
Bra004641 Brassica rapa Bra004641 N 0.691
Bo4g013420 Brassica oleracea Bo4g013420 N 0.691
Bo3g035770 Brassica oleracea Bo3g035770 N 0.693
BGIOSGA023402 Oryza indica BGIOSGA023402 N 0.814
BGIOSGA019793 Oryza indica BGIOSGA019793 N 0.698
AT2G41710 Arabidopsis thaliana AT2G41710 N 0.691
OPUNC05G13110 Oryza punctata OPUNC05G13110 N 0.698
Traes_6AS_53FA034C9 Triticum aestivum Traes_6AS_53FA034C9 N 0.683
TCM_024554 Theobroma cacao TCM_024554 N 0.691
Si021952m.g Setaria italica Si021952m.g N 0.696
Sb09g019190 Sorghum bicolor Sb09g019190 N 0.698
PRUPE_ppa006202mg Prunus persica PRUPE_ppa006202mg N 0.693
POPTR_0016s05670 Populus trichocarpa POPTR_0016s05670 N 0.693
POPTR_0006s04820 Populus trichocarpa POPTR_0006s04820 N 0.693
ORUFI05G16140 Oryza rufipogon ORUFI05G16140 N 0.698
ORGLA05G0129100 Oryza glaberrima ORGLA05G0129100 N 0.696
AMTR_s00159p00062070 Amborella trichopoda AMTR_s00159p00062070 N 0.696
ONIVA05G15390 Oryza nivara ONIVA05G15390 N 0.698
OMERI06G23370 Oryza meridionalis OMERI06G23370 N 0.814
OMERI05G13370 Oryza meridionalis OMERI05G13370 N 0.698
OLONG_020459 Oryza longistaminata OLONG_020459 N 0.698
OLONG_002212 Oryza longistaminata OLONG_002212 N 0.814
OGLUM05G15890 Oryza glumaepatula OGLUM05G15890 N 0.698
OBART06G23380 Oryza barthii OBART06G23380 N 0.814
OBART05G15060 Oryza barthii OBART05G15060 N 0.698
OB06G31060 Oryza brachyantha OB06G31060 N 0.814