Lus10028032.g (Linum usitatissimum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Lus10028032.g T008860_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF014
M06581_2.00 		Arabidopsis thaliana
YCDYCDCCACCGHCD
HGDCGGTGGHGRHGR		 Dap-seq
OMalley et al.(2016)
AT1G44830_col_a 		0.796 0.980
ERF012
M06570_2.00 		Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC
GDCGGTGGHDDHDDNDNNDN		 Dap-seq
OMalley et al.(2016)
DREB26_col_a 		0.782 0.940
ERF013
M06601_2.00 		Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN
NNNNNNDNHDDTGDCGGTGRH		 Dap-seq
OMalley et al.(2016)
At1g77640_col_a 		0.763 0.940
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10028032 AP2 31 82

Links

Other AP2 family TFs
Other Linum usitatissimum TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MET32 Saccharomyces cerevisiae YDR253C D
MET31 Saccharomyces cerevisiae YPL038W D
Scas_Contig568.5 Saccharomyces castellii Scas_Contig568.5 I
SU7_3598 Saccharomyces arboricola SU7_3598 I
TBLA_0A00350 Tetrapisispora blattae TBLA_0A00350 I
TPHA_0L01320 Tetrapisispora phaffii TPHA_0L01320 I
ZBAI_00597 Zygosaccharomyces bailii ZBAI_00597 I
ZBAI_05898 Zygosaccharomyces bailii ZBAI_05898 I
ZYRO0F08162g Zygosaccharomyces rouxii ZYRO0F08162g I
SKUD_191509 Saccharomyces kudriavzevii SKUD_191509 I
22143_YPL038W Saccharomyces mikatae 22143_YPL038W I
23564_YPL038W Saccharomyces paradoxus 23564_YPL038W I
25018_YPL038W Saccharomyces bayanus 25018_YPL038W I
3987_YDR253C Saccharomyces mikatae 3987_YDR253C I
4678_YDR253C Saccharomyces paradoxus 4678_YDR253C I
KLTH0E11330g Kluyveromyces thermotolerans KLTH0E11330g I
Kwal_11824 Kluyveromyces waltii Kwal_11824 I
SAKL0H11440g Lachancea kluyveri SAKL0H11440g I
KAFR_0E02900 Kazachstania africana KAFR_0E02900 I
BN7_573 Wickerhamomyces ciferrii BN7_573 I
KLLA0_D11902g Kluyveromyces lactis KLLA0_D11902g I
LALA0_S04e04720g Lachancea lanzarotensis LALA0_S04e04720g I
NCAS_0C02430 Naumovozyma castellii NCAS_0C02430 I
NDAI_0C05210 Naumovozyma dairenensis NDAI_0C05210 I
SKUD_139603 Saccharomyces kudriavzevii SKUD_139603 I
LELG_02390 Lodderomyces elongisporus LELG_02390 N
Kpol_1031p73 Vanderwaltozyma polyspora Kpol_1031p73 N
NDAI_0E03120 Naumovozyma dairenensis NDAI_0E03120 N
CLUG_05144 Candida lusitaniae CLUG_05144 N
G210_5850 Candida maltosa G210_5850 N
CTRG_02010 Candida tropicalis CTRG_02010 N
CLUG_05144 Clavispora lusitaniae CLUG_05144 N
CD36_24290 Candida dubliniensis CD36_24290 N
CaO19.9326 Candida albicans CaO19.9326 N
CaO19.1757 Candida albicans CaO19.1757 N
CAGL0L12562g Candida glabrata CAGL0L12562g N