orange1.1g032263m.g (Citrus sinensis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 orange1.1g032263m.g T009254_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
A5JTT1_WHEAT
M09700_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF3_01 		0.757 0.765
ERF094
M01602_2.00 		Arabidopsis thaliana
VGCCGCCD
HGGCGGCB		 PBM
Weirauch et al.(2014)
pTH8276 		0.717 0.745
ERF105
M01632_2.00 		Arabidopsis thaliana
CGCCGGCM
KGCCGGCG		 PBM
Weirauch et al.(2014)
pTH7233 		0.680 0.706
ERF105
M06676_2.00 		Arabidopsis thaliana
NHNNNNNNNNHNNHDBCGCCGCCR
YGGCGGCGVHDNNDNNNNNNNNDN		 Dap-seq
OMalley et al.(2016)
ERF105_colamp_a 		0.680 0.706
ERF105
M06677_2.00 		Arabidopsis thaliana
HDSCGCCGCCRYHDH
DHDRYGGCGGCGSHD		 Dap-seq
OMalley et al.(2016)
ERF105_col 		0.680 0.706
ERF095
M06624_2.00 		Arabidopsis thaliana
YCDCCGCCGCCRYHD
HDRYGGCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ESE1_col_a 		0.677 0.706
ERF095
M06625_2.00 		Arabidopsis thaliana
YHNYYDYHDCCGCCGCCDYH
DRHGGCGGCGGHDRHRRNDR		 Dap-seq
OMalley et al.(2016)
ESE1_colamp_a 		0.677 0.706
ERF1A
M00848_2.00 		Arabidopsis thaliana
NNNNRNN
NNYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ATERF1 		0.677 0.745
ERF1A
M00720_2.00 		Arabidopsis thaliana
NMGCCRNCN
NGNYGGCKN		 PBM
Chang et al.(2013)
pTH7202 		0.677 0.745
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g032263m AP2 54 106

Links

Other AP2 family TFs
Other Citrus sinensis TFs

271 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava11642.m1 Manihot esculenta cassava11642.m1 I
OGLUM01G30780 Oryza glumaepatula OGLUM01G30780 I
ORGLA01G0219900 Oryza glaberrima ORGLA01G0219900 I
ORUFI01G29860 Oryza rufipogon ORUFI01G29860 I
AMTR_s00056p00204920 Amborella trichopoda AMTR_s00056p00204920 I
Sb09g027800 Sorghum bicolor Sb09g027800 I
Si022874m.g Setaria italica Si022874m.g I
TCM_037728 Theobroma cacao TCM_037728 I
Traes_5BL_C1D4586B1 Triticum aestivum Traes_5BL_C1D4586B1 I
VIT_11s0016g02780 Vitis vinifera VIT_11s0016g02780 I
PGSC0003DMG400000349 Solanum tuberosum PGSC0003DMG400000349 I
Cucsa.288590 Cucumis sativus Cucsa.288590 I
mgf017404m Mimulus guttatus mgf017404m I
Ciclev10009336m.g Citrus clementina Ciclev10009336m.g I
Eucgr.C00624 Eucalyptus grandis Eucgr.C00624 I
Gorai.001G024300 Gossypium raimondii Gorai.001G024300 I
orange1.1g037024m.g Citrus sinensis orange1.1g037024m.g I
Pavir.J11789 Panicum virgatum Pavir.J11789 I
Pavir.J15551 Panicum virgatum Pavir.J15551 I
GSMUA_Achr9G09790_001 Musa acuminata GSMUA_Achr9G09790_001 I
BGIOSGA004221 Oryza indica BGIOSGA004221 I
F775_22184 Aegilops tauschii F775_22184 I
GLYMA14G10483 Glycine max GLYMA14G10483 I
GRMZM2G069325 Zea mays GRMZM2G069325 I
LPERR05G20870 Leersia perrieri LPERR05G20870 I
MLOC_5098 Hordeum vulgare MLOC_5098 I
OBART01G26850 Oryza barthii OBART01G26850 I
MTR_6g090405 Medicago truncatula MTR_6g090405 I
GRMZM2G151205 Zea mays GRMZM2G151205 N
OGLUM01G33320 Oryza glumaepatula OGLUM01G33320 N
BGIOSGA004364 Oryza indica BGIOSGA004364 N
Pavir.Eb02926 Panicum virgatum Pavir.Eb02926 N
Pavir.Eb00254 Panicum virgatum Pavir.Eb00254 N
Pavir.Ea02676 Panicum virgatum Pavir.Ea02676 N
Pavir.Ea00256 Panicum virgatum Pavir.Ea00256 N
ONIVA01G33470 Oryza nivara ONIVA01G33470 N
F775_22442 Aegilops tauschii F775_22442 N
F775_22853 Aegilops tauschii F775_22853 N
GRMZM2G001875 Zea mays GRMZM2G001875 N
OB01G38240 Oryza brachyantha OB01G38240 N
GRMZM2G167829 Zea mays GRMZM2G167829 N
TRIUR3_25771 Triticum urartu TRIUR3_25771 N
TRIUR3_05615 Triticum urartu TRIUR3_05615 N
OBART01G29250 Oryza barthii OBART01G29250 N
TRAES3BF016200140CFD_g Triticum aestivum TRAES3BF016200140CFD_g N
Traes_3AL_7C031019E Triticum aestivum Traes_3AL_7C031019E N
ORUFI01G32340 Oryza rufipogon ORUFI01G32340 N
OS01G0722300 Oryza sativa OS01G0722300 N
Si004558m.g Setaria italica Si004558m.g N
Si002629m.g Setaria italica Si002629m.g N
MLOC_67874 Hordeum vulgare MLOC_67874 N
Sb03g003120 Sorghum bicolor Sb03g003120 N