Pavir.Bb02294 (Panicum virgatum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pavir.Bb02294 T009383_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CRF3
M01633_2.00 		Arabidopsis thaliana
NNGCCRNNN
NNNYGGCNN		 PBM
Weirauch et al.(2014)
pTH8110 		0.694 0.714
CRF2
M01622_2.00 		Arabidopsis thaliana
SCGCCGCC
GGCGGCGS		 PBM
Weirauch et al.(2014)
pTH8680 		0.680 0.714
CRF4
M01626_2.00 		Arabidopsis thaliana
SCGCCGCC
GGCGGCGS		 PBM
Weirauch et al.(2014)
pTH8261 		0.679 0.694
CRF4
M06645_2.00 		Arabidopsis thaliana
BMDCCGCCGCCRCHDHHDCYN
NRGHDDHDGYGGCGGCGGHKV		 Dap-seq
OMalley et al.(2016)
CRF4_col_a 		0.679 0.694
CRF4
M06646_2.00 		Arabidopsis thaliana
YCDYCGCCGCCGYYD
HRRCGGCGGCGRHGR		 Dap-seq
OMalley et al.(2016)
CRF4_colamp_a 		0.679 0.694
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Bb02294.1.p AP2 97 147

Links

Other AP2 family TFs
Other Panicum virgatum TFs

104 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DRE_06964 Drechslerella stenobrocha DRE_06964 I
G647_06910 Cladophialophora carrionii G647_06910 I
CIMG_08549 Coccidioides immitis CIMG_08549 N
MCYG_02334 Microsporum canis MCYG_02334 N
SNOG_08309 Stagonospora nodorum SNOG_08309 N
A1O1_04043 Capronia coronata A1O1_04043 N
A1O3_01459 Capronia epimyces A1O3_01459 N
A1O5_07765 Cladophialophora psammophila A1O5_07765 N
A1O7_05617 Cladophialophora yegresii A1O7_05617 N
A1O9_03914 Exophiala aquamarina A1O9_03914 N
ACRE_057790 Acremonium chrysogenum ACRE_057790 N
AOL_s00043g47 Arthrobotrys oligospora AOL_s00043g47 N
ARB_06070 Arthroderma benhamiae ARB_06070 N
AUEXF2481DRAFT_4075 Aureobasidium subglaciale AUEXF2481DRAFT_4075 N
BAUCODRAFT_151200 Baudoinia compniacensis BAUCODRAFT_151200 N
BBA_04216 Beauveria bassiana BBA_04216 N
Bcin02g02960 Botrytis cinerea Bcin02g02960 N
BDDG_07871 Blastomyces dermatitidis BDDG_07871 N
BGHDH14_bgh06000 Blumeria graminis BGHDH14_bgh06000 N
CADAFLAG00013433 Aspergillus flavus CADAFLAG00013433 N
AFUA_4G04502 Aspergillus fumigatus CADAFUAG00001430 N
CADANGAG00010969 Aspergillus niger CADANGAG00010969 N
ATEG_02742 Aspergillus terreus CADATEAG00003788 N
NFIA_028860 Neosartorya fischeri CADNFIAG00002767 N
CCM_02465 Cordyceps militaris CCM_02465 N
CFIO01_04547 Colletotrichum fioriniae CFIO01_04547 N
CGGC5_1651 Colletotrichum gloeosporioides CGGC5_1651 N
Cob_03924 Colletotrichum orbiculare Cob_03924 N
COCC4DRAFT_137933 Bipolaris maydis COCC4DRAFT_137933 N
COCCADRAFT_23204 Bipolaris zeicola COCCADRAFT_23204 N
COCMIDRAFT_90826 Bipolaris oryzae COCMIDRAFT_90826 N
COCSADRAFT_237465 Bipolaris sorokiniana COCSADRAFT_237465 N
COCVIDRAFT_100540 Bipolaris victoriae COCVIDRAFT_100540 N
CPC735_062070 Coccidioides posadasii CPC735_062070 N
CPUR_00409 Claviceps purpurea CPUR_00409 N
CSUB01_10826 Colletotrichum sublineola CSUB01_10826 N
DOTSEDRAFT_73714 Dothistroma septosporum DOTSEDRAFT_73714 N
EPUS_01915 Endocarpon pusillum EPUS_01915 N
EURHEDRAFT_462177 Aspergillus ruber EURHEDRAFT_462177 N
EV44_g0556 Erysiphe necator EV44_g0556 N
FFUJ_08331 Fusarium fujikuroi FFUJ_08331 N
FGRRES_10868 Fusarium graminearum FGRRES_10868 N
FOXG_12803 Fusarium oxysporum FOXG_12803 N
FPSE_09836 Fusarium pseudograminearum FPSE_09836 N
FVEG_11544 Fusarium verticillioides FVEG_11544 N
GGTG_10719 Gaeumannomyces graminis GGTG_10719 N
GLRG_05271 Colletotrichum graminicola GLRG_05271 N
GMDG_00035 Pseudogymnoascus destructans GMDG_00035 N
GSTUM_00004466001 Tuber melanosporum GSTUM_00004466001 N
H072_3239 Dactylellina haptotyla H072_3239 N
H101_00214 Trichophyton interdigitale H101_00214 N
H105_03092 Trichophyton soudanense H105_03092 N
HCBG_08291 Histoplasma capsulatum HCBG_08291 N
HMPREF1120_08552 Exophiala dermatitidis HMPREF1120_08552 N
HMPREF1541_00864 Cyphellophora europaea HMPREF1541_00864 N
LEMA_P076740.1 Leptosphaeria maculans LEMA_P076740.1 N
M437DRAFT_56721 Aureobasidium melanogenum M437DRAFT_56721 N
M438DRAFT_272047 Aureobasidium pullulans M438DRAFT_272047 N
MAJ_01594 Metarhizium majus MAJ_01594 N
MAM_02919 Metarhizium album MAM_02919 N
MANI_027126 Metarhizium anisopliae MANI_027126 N
MAPG_00013 Magnaporthe poae MAPG_00013 N
MBR_04590 Metarhizium brunneum MBR_04590 N
MCYG_02334 Arthroderma otae MCYG_02334 N
MGG_06971 Magnaporthe oryzae MGG_06971 N
MGU_04157 Metarhizium guizhouense MGU_04157 N
MGYG_07335 Microsporum gypseum MGYG_07335 N
MPH_02552 Macrophomina phaseolina MPH_02552 N
MYCFIDRAFT_146678 Pseudocercospora fijiensis MYCFIDRAFT_146678 N
Mycgr3G38379 Zymoseptoria tritici Mycgr3G38379 N
NechaG40194 Fusarium solani NechaG40194 N
OCS_04575 Ophiocordyceps sinensis OCS_04575 N
OIDMADRAFT_181379 Oidiodendron maius OIDMADRAFT_181379 N
PAAG_01459 Paracoccidioides sp lutzii PAAG_01459 N
PABG_01939 Paracoccidioides brasiliensis PABG_01939 N
PCH_Pc13g06670 Penicillium rubens PCH_Pc13g06670 N
PDE_05764 Penicillium oxalicum PDE_05764 N
PDIP_15740 Penicillium digitatum PDIP_15740 N
PEX1_020890 Penicillium expansum PEX1_020890 N
PMAA_085950 Talaromyces marneffei PMAA_085950 N
PODANS_3_7650 Podospora anserina PODANS_3_7650 N
PTRG_08428 Pyrenophora triticirepentis PTRG_08428 N
PTT_06554 Pyrenophora teres PTT_06554 N
PV04_05986 Capronia semiimmersa PV04_05986 N
PV05_05603 Exophiala xenobiotica PV05_05603 N
PV06_00857 Exophiala oligosperma PV06_00857 N
PV07_04143 Cladophialophora immunda PV07_04143 N
PV08_00880 Exophiala spinifera PV08_00880 N
PV09_01119 Verruconis gallopava PV09_01119 N
PV10_07698 Exophiala mesophila PV10_07698 N
PV11_00595 Exophiala sideris PV11_00595 N
PVAR5_3532 Byssochlamys spectabilis PVAR5_3532 N
S40285_02996 Stachybotrys chlorohalonata S40285_02996 N
S40288_00568 Stachybotrys chartarum S40288_00568 N
SAPIO_CDS6018 Scedosporium apiospermum SAPIO_CDS6018 N
SBOR_3380 Sclerotinia borealis SBOR_3380 N
SEPMUDRAFT_47596 Sphaerulina musiva SEPMUDRAFT_47596 N
SETTUDRAFT_34274 Setosphaeria turcica SETTUDRAFT_34274 N
SMAC_00003 Sordaria macrospora SMAC_00003 N
SPBR_01490 Sporothrix brasiliensis SPBR_01490 N
TESG_06359 Trichophyton tonsurans TESG_06359 N
THITE_2123849 Thielavia terrestris THITE_2123849 N
TRIATDRAFT_174226 Trichoderma atroviride TRIATDRAFT_174226 N
TRIREDRAFT_27357 Trichoderma reesei TRIREDRAFT_27357 N
TRIVIDRAFT_125026 Trichoderma virens TRIVIDRAFT_125026 N
TRV_00290 Trichophyton verrucosum TRV_00290 N
TSTA_121070 Talaromyces stipitatus TSTA_121070 N
U727_0043017041 Penicillium solitum U727_0043017041 N
UREG_02611 Uncinocarpus reesii UREG_02611 N
UV8b_4500 Ustilaginoidea virens UV8b_4500 N
V499_07683 Pseudogymnoascus pannorum V499_07683 N
VDAG_07492 Verticillium dahliae VDAG_07492 N
VHEMI09490 Torrubiella hemipterigena VHEMI09490 N
W97_04615 Coniosporium apollinis W97_04615 N
X797_007282 Metarhizium robertsii X797_007282 N
Z517_00530 Fonsecaea pedrosoi Z517_00530 N
Z518_08730 Rhinocladiella mackenziei Z518_08730 N
Z519_07578 Cladophialophora bantiana Z519_07578 N
e_gw1.12.536.1 Nectria haematococca e_gw1.12.536.1 N
e_gw1.3.1300.1 Mycosphaerella graminicola e_gw1.3.1300.1 N
estExt_fgenesh2_pg.C_100130 Neurospora discreta estExt_fgenesh2_pg.C_100130 N
estExt_Genewise1Plus.C_50691 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_50691 N
gw1.18.319.1 Mycosphaerella fijiensis gw1.18.319.1 N
hsf-2 Neurospora crassa NCU08480 N
estExt_Genewise1Plus.C_21911 Cryphonectria parasitica estExt_Genewise1Plus.C_21911 N
fgenesh1_pg.00795_#_26 Aspergillus carbonarius fgenesh1_pg.00795_#_26 N
Pc13g06670 Penicillium chrysogenum Pc13g06670 N
PMAA_085950 Penicillium marneffei PMAA_085950 N