Thhalv10000302m.g (Eutrema salsugineum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Thhalv10000302m.g T009873_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.780 0.880
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.780 0.880
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.770 0.860
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10000302m AP2 67 118

Links

Other AP2 family TFs
Other Eutrema salsugineum TFs

425 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GA17308 Drosophila pseudoobscura FBgn0077321 N
GF12989 Drosophila ananassae FBgn0090023 N
GG20813 Drosophila erecta FBgn0112999 N
GH21375 Drosophila grimshawi FBgn0128837 N
GI18551 Drosophila mojavensis FBgn0141290 N
GL10189 Drosophila persimilis FBgn0147799 N
GM15760 Drosophila sechellia FBgn0170676 N
GJ20345 Drosophila virilis FBgn0207485 N
GK23250 Drosophila willistoni FBgn0225212 N
GE13753 Drosophila yakuba FBgn0231406 N