Thhalv10003485m.g (Eutrema salsugineum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Thhalv10003485m.g T009884_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.817 0.898
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.817 0.898
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.801 0.857
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10003485m AP2 91 142

Links

Other AP2 family TFs
Other Eutrema salsugineum TFs

424 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_034992 Theobroma cacao TCM_034992 I 0.000
PRUPE_ppa024363mg Prunus persica PRUPE_ppa024363mg N 0.000
Pm019140 Prunus mume Pm019140 N 0.000
Ciclev10003120m.g Citrus clementina Ciclev10003120m.g N 0.000
Eucgr.H00931 Eucalyptus grandis Eucgr.H00931 N 0.000
evm.TU.supercontig_1782.2 Carica papaya evm.TU.supercontig_1782.2 N 0.000
gene31321-v1.0-hybrid Fragaria vesca gene31321-v1.0-hybrid N 0.000
Gorai.010G045600 Gossypium raimondii Gorai.010G045600 N 0.000
MDP0000250947 Malus domestica MDP0000250947 N 0.000
orange1.1g045277m.g Citrus sinensis orange1.1g045277m.g N 0.000
SapurV1A.0331s0170 Salix purpurea SapurV1A.0331s0170 N 0.000