CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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chr2.CM0225.20.nc
(
Lotus japonicus
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
chr2.CM0225.20.nc
T010166_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
chr2.CM0225.20.nc
AP2
53
110
SRFRGVSRHRWTGRYEAHLWDKLSWNMTQKKKGKQGAYDEEESAARAYDLAALKYWGT
chr2.CM0225.20.nc
AP2
152
204
SKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYRTQEEAARAYDIAAIECRGI
Links
Other
AP2
family TFs
Other
Lotus japonicus
TFs
296 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA037669
Oryza indica
BGIOSGA037669
N
BGIOSGA040723
Oryza indica
BGIOSGA040723
N
OBART12G16840
Oryza barthii
OBART12G16840
N
OBART12G16850
Oryza barthii
OBART12G16850
N
OGLUM12G18510
Oryza glumaepatula
OGLUM12G18510
N
OLONG_010455
Oryza longistaminata
OLONG_010455
N
OMERI01G15810
Oryza meridionalis
OMERI01G15810
N
OPUNC12G15350
Oryza punctata
OPUNC12G15350
N
ORUFI12G18690
Oryza rufipogon
ORUFI12G18690
N