CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.20505s0106
(
Boechera stricta
)
AP-2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03299 (TF_AP-2)
IPR013854
Bostr.20505s0106
T011222_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.20505s0106.1.p
AP-2
98
250
LREVASLEGHVMLKKLRDALEYMRGRTDGQNKEDVETAISMVEALAVKLTQNEGELIQEKFEVKKLGNFLKQTSEDAKKLVNQEKSFACAEIETARAIVLRLGEAFEEQERISEASRAQGPDVEKLVEEVQEARQIKRMHHPTKVMGMQHELH
Links
Other
AP-2
family TFs
Other
Boechera stricta
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SCAB3
Arabidopsis thaliana
AT3G56480
N
0.838
Bo6g071150
Brassica oleracea
Bo6g071150
N
0.716
Bo8g090870
Brassica oleracea
Bo8g090870
N
0.789
Bra003242
Brassica rapa
Bra003242
N
0.746
Bra007248
Brassica rapa
Bra007248
N
0.824
fgenesh1_pm.C_scaffold_5001705
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_5001705
N
0.944
Cagra.0925s0063
Capsella grandiflora
Cagra.0925s0063
N
0.985
Carubv10019330m.g
Capsella rubella
Carubv10019330m.g
N
0.944
Thhalv10005916m.g
Eutrema salsugineum
Thhalv10005916m.g
N
0.964