CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRIVIDRAFT_133620
(
Trichoderma virens
)
APSES
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04383 (KilA-N)
IPR018004
TRIVIDRAFT_133620
T012393_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
e_gw1.5.76.1
M01652_2.00
Nectria haematococca
NNVTGCABNN
NNVTGCABNN
PBM
Weirauch et al.(2014)
pTH9267
0.868
0.976
HCAG_07413
M01651_2.00
Histoplasma capsulatum
NNNHRYDNNN
NNNHRYDNNN
PBM
Weirauch et al.(2014)
pTH9346
0.839
0.916
stuA
M01649_2.00
Aspergillus nidulans
NNTGCAKNNN
NNNMTGCANN
PBM
Weirauch et al.(2014)
pTH9236
0.724
0.843
stuA
M09761_2.00
Aspergillus nidulans
DBDCGCGWWB
VWWCGCGHVH
Transfac
Matys et al.(2006)
F$STUAP_01
0.724
0.843
For this family, TFs with SR scores >
0.650
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EHK27127
APSES
127
214
FQVEARGICVARREDNHMINGTKLLNVAGMTRGRRDGILKSEKVRHVVKIGPMHLKGVWIPYERALDFANKEKITEMLYPLFVHNIGA
Links
Other
APSES
family TFs
Other
Trichoderma virens
TFs
165 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP15271
Atta cephalotes
ACEP15271
N
0.000
CGI_10005894
Crassostrea gigas
CGI_10005894
N
0.000
Atac1
Drosophila melanogaster
FBgn0031876
N
0.000
GF14463
Drosophila ananassae
FBgn0091490
N
0.000
GG23563
Drosophila erecta
FBgn0115708
N
0.000
GH13580
Drosophila grimshawi
FBgn0121056
N
0.000
GM13698
Drosophila sechellia
FBgn0168629
N
0.000
GJ21463
Drosophila virilis
FBgn0208589
N
0.000
GK18102
Drosophila willistoni
FBgn0220101
N
0.000
GE18387
Drosophila yakuba
FBgn0235806
N
0.000
GB55193
Apis mellifera
GB55193
N
0.000
L798_06852
Zootermopsis nevadensis
L798_06852
N
0.000
NV13275
Nasonia vitripennis
NV13275
N
0.000
SINV25019
Solenopsis invicta
SINV25019
N
0.000
Cflo_03461--XP_391891.1_APIME
Camponotus floridanus
Cflo_03461--XP_391891.1_APIME
N
0.000
Hsal_01990--XP_391891.1_APIME
Harpegnathos saltator
Hsal_01990--XP_391891.1_APIME
N
0.000