CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GG22872
(
Drosophila erecta
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
IPR001606
FBgn0115029
T014874_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
retn
M01664_2.00
Drosophila melanogaster
NDATHRNN
NNYDATHN
PBM
Weirauch et al.(2014)
pTH5119
0.785
0.988
retn
M03590_2.00
Drosophila melanogaster
NNATTRATHN
NDATYAATNN
SELEX
Nitta et al.(2015)
retn_1
0.785
0.988
retn
M05899_2.00
Drosophila melanogaster
AATYAAAM
KTTTRATT
B1H
Zhu et al.(2011)
retn_SANGER_5_FBgn0004795
0.785
0.988
retn
M09768_2.00
Drosophila melanogaster
NNRATTAADN
NHTTAATYNN
Transfac
Matys et al.(2006)
I$DRI_01
0.785
0.988
ACYPI009013
M01655_2.00
Acyrthosiphon pisum
NDATHAADN
NHTTDATHN
PBM
Weirauch et al.(2014)
pTH5117
0.762
0.756
ARID3A
M01658_2.00
Microcebus murinus
NDATHAWDN
NHWTDATHN
PBM
Weirauch et al.(2014)
pTH9214
0.706
0.837
Arid3a
M00115_2.00
Mus musculus
NDATHADDN
NHHTDATHN
PBM
Badis et al.(2009)
Arid3a_3875
0.706
0.837
Arid3a
M01660_2.00
Mus musculus
NDATHAADN
NHTTDATHN
PBM
Weirauch et al.(2014)
pTH5169
0.706
0.837
Arid3a
M02651_2.00
Mus musculus
ATYAAA
TTTRAT
SELEX
Mathelier et al.(2014)
MA0151.1
0.706
0.837
ARID3A
M09766_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DRI1_01
0.706
0.837
ARID3A
M01662_2.00
Procavia capensis
NNATHDNNN
NNNHDATNN
PBM
Weirauch et al.(2014)
pTH9384
0.706
0.826
cfi-1
M01667_2.00
Caenorhabditis elegans
NNATHDNN
NNHDATNN
PBM
Weirauch et al.(2014)
pTH5118
0.682
0.733
DDB_G0275333
M01656_2.00
Dictyostelium discoideum
NNATHDNNNN
NNNNHDATNN
PBM
Weirauch et al.(2014)
pTH5168
0.670
0.512
Arid3b
M01659_2.00
Mus musculus
NNDATTAAWWN
NWWTTAATHNN
PBM
Weirauch et al.(2014)
pTH4425
0.644
0.791
GSPATT00004674001
M01665_2.00
Paramecium tetraurelia
NNATYHNN
NNDRATNN
PBM
Weirauch et al.(2014)
pTH5124
0.541
0.395
TTHERM_00243900
M01666_2.00
Tetrahymena thermophila
NDDATYANN
NNTRATHHN
PBM
Weirauch et al.(2014)
pTH5128
0.508
0.372
For this family, TFs with SR scores >
0.422
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0141418
ARID/BRIGHT
290
376
KRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVITRGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYE
Links
Other
ARID/BRIGHT
family TFs
Other
Drosophila erecta
TFs
378 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MXI1
Homo sapiens
ENSG00000119950
D
Mxi1
Mus musculus
ENSMUSG00000025025
D
ACYPI005198
Acyrthosiphon pisum
ACYPI005198
I
EFV61981
Trichinella spiralis
EFV61981
I
MXD1
Anolis carolinensis
ENSACAG00000006004
I
MXI1
Anolis carolinensis
ENSACAG00000006009
I
ENSAMEG00000005262
Ailuropoda melanoleuca
ENSAMEG00000005262
I
ENSAMEG00000016108
Ailuropoda melanoleuca
ENSAMEG00000016108
I
ENSAMXG00000004433
Astyanax mexicanus
ENSAMXG00000004433
I
ENSAPLG00000004350
Anas platyrhynchos
ENSAPLG00000004350
I
MXD1
Bos taurus
ENSBTAG00000001042
I
MXI1
Bos taurus
ENSBTAG00000017263
I
MXI1
Canis familiaris
ENSCAFG00000010706
I
MXD1
Canis familiaris
ENSCAFG00000032746
I
MXD1
Choloepus hoffmanni
ENSCHOG00000003047
I
MXI1
Choloepus hoffmanni
ENSCHOG00000006556
I
MXI1
Callithrix jacchus
ENSCJAG00000018614
I
MXD1
Callithrix jacchus
ENSCJAG00000019266
I
ENSCPOG00000000336
Cavia porcellus
ENSCPOG00000000336
I
ENSCPOG00000007162
Cavia porcellus
ENSCPOG00000007162
I
MXI1
Cavia porcellus
ENSCPOG00000022901
I
ENSCSAG00000005171
Chlorocebus sabaeus
ENSCSAG00000005171
I
ENSCSAG00000015119
Chlorocebus sabaeus
ENSCSAG00000015119
I
mxi1
Danio rerio
ENSDARG00000040884
I
MXI1
Dasypus novemcinctus
ENSDNOG00000002479
I
MXD1
Dasypus novemcinctus
ENSDNOG00000034010
I
ENSDORG00000001608
Dipodomys ordii
ENSDORG00000001608
I
Mxi1
Dipodomys ordii
ENSDORG00000005656
I
MXD1
Equus caballus
ENSECAG00000011257
I
MXD1
Echinops telfairi
ENSETEG00000017347
I
MXI1
Echinops telfairi
ENSETEG00000018880
I
ENSFALG00000002308
Ficedula albicollis
ENSFALG00000002308
I
MXI1
Felis catus
ENSFCAG00000004882
I
MXD1
Felis catus
ENSFCAG00000030345
I
MXD1
Homo sapiens
ENSG00000059728
I
mxd1
Gasterosteus aculeatus
ENSGACG00000013215
I
ENSGACG00000018716
Gasterosteus aculeatus
ENSGACG00000018716
I
MXI1
Gallus gallus
ENSGALG00000008555
I
MXD1
Gallus gallus
ENSGALG00000013882
I
MXD1
Gorilla gorilla
ENSGGOG00000011287
I
MXI1
Gorilla gorilla
ENSGGOG00000013614
I
ENSGMOG00000014798
Gadus morhua
ENSGMOG00000014798
I
ENSLACG00000017438
Latimeria chalumnae
ENSLACG00000017438
I
MXI1
Loxodonta africana
ENSLAFG00000014348
I
ENSLOCG00000012358
Lepisosteus oculatus
ENSLOCG00000012358
I
ENSLOCG00000015320
Lepisosteus oculatus
ENSLOCG00000015320
I
ENSMEUG00000013693
Macropus eugenii
ENSMEUG00000013693
I
MXD1
Meleagris gallopavo
ENSMGAG00000003405
I
MXI1
Meleagris gallopavo
ENSMGAG00000010768
I
ENSMMUG00000010226
Macaca mulatta
ENSMMUG00000010226
I
MXI1
Macaca mulatta
ENSMMUG00000014350
I
MXI1
Monodelphis domestica
ENSMODG00000010546
I
MXD1
Monodelphis domestica
ENSMODG00000011481
I
ENSMPUG00000002095
Mustela putorius furo
ENSMPUG00000002095
I
ENSMPUG00000007107
Mustela putorius furo
ENSMPUG00000007107
I
Mxd1
Mus musculus
ENSMUSG00000001156
I
ENSNLEG00000010141
Nomascus leucogenys
ENSNLEG00000010141
I
ENSNLEG00000015457
Nomascus leucogenys
ENSNLEG00000015457
I
MXI1
Ornithorhynchus anatinus
ENSOANG00000001600
I
ENSOARG00000009456
Ovis aries
ENSOARG00000009456
I
ENSOARG00000019742
Ovis aries
ENSOARG00000019742
I
MXD1
Oryctolagus cuniculus
ENSOCUG00000015820
I
MXI1
Otolemur garnettii
ENSOGAG00000000570
I
MXD1
Otolemur garnettii
ENSOGAG00000008412
I
ENSONIG00000000432
Oreochromis niloticus
ENSONIG00000000432
I
ENSONIG00000015871
Oreochromis niloticus
ENSONIG00000015871
I
ENSONIG00000016308
Oreochromis niloticus
ENSONIG00000016308
I
MXI1
Oryzias latipes
ENSORLG00000005955
I
mxi1
Oryzias latipes
ENSORLG00000015172
I
mxd1
Oryzias latipes
ENSORLG00000015461
I
ENSPANG00000000314
Papio anubis
ENSPANG00000000314
I
ENSPANG00000020804
Papio anubis
ENSPANG00000020804
I
MXD1
Procavia capensis
ENSPCAG00000001189
I
MXI1
Procavia capensis
ENSPCAG00000016142
I
ENSPFOG00000004367
Poecilia formosa
ENSPFOG00000004367
I
ENSPFOG00000017086
Poecilia formosa
ENSPFOG00000017086
I
ENSPFOG00000021922
Poecilia formosa
ENSPFOG00000021922
I
ENSPMAG00000001074
Petromyzon marinus
ENSPMAG00000001074
I
ENSPPYG00000012331
Pongo abelii
ENSPPYG00000012331
I
ENSPSIG00000012742
Pelodiscus sinensis
ENSPSIG00000012742
I
MXI1
Pan troglodytes
ENSPTRG00000002936
I
MXD1
Pan troglodytes
ENSPTRG00000012023
I
MXD1
Pteropus vampyrus
ENSPVAG00000001244
I
MXI1
Pteropus vampyrus
ENSPVAG00000014983
I
Mxd1
Rattus norvegicus
ENSRNOG00000017720
I
Mxi1
Rattus norvegicus
ENSRNOG00000034078
I
MXD1
Sorex araneus
ENSSARG00000004728
I
ENSSHAG00000005374
Sarcophilus harrisii
ENSSHAG00000005374
I
MXD1
Sus scrofa
ENSSSCG00000008334
I
ENSSTOG00000000718
Ictidomys tridecemlineatus
ENSSTOG00000000718
I
ENSSTOG00000025776
Ictidomys tridecemlineatus
ENSSTOG00000025776
I
MXD1
Tupaia belangeri
ENSTBEG00000005535
I
ENSTBEG00000017602
Tupaia belangeri
ENSTBEG00000017602
I
ENSTGUG00000010598
Taeniopygia guttata
ENSTGUG00000010598
I
mxd1
Tetraodon nigroviridis
ENSTNIG00000000414
I
mxi1
Tetraodon nigroviridis
ENSTNIG00000010585
I
MXI1
Tetraodon nigroviridis
ENSTNIG00000013330
I
MXI1
Takifugu rubripes
ENSTRUG00000006785
I
MXI1
Tursiops truncatus
ENSTTRG00000007895
I
MXD1
Vicugna pacos
ENSVPAG00000001762
I
MXI1
Vicugna pacos
ENSVPAG00000003400
I
ENSXMAG00000004566
Xiphophorus maculatus
ENSXMAG00000004566
I
ENSXMAG00000007056
Xiphophorus maculatus
ENSXMAG00000007056
I
ENSXMAG00000012758
Xiphophorus maculatus
ENSXMAG00000012758
I
LotgiG220594
Lottia gigantea
LotgiG220594
I
NV10716
Nasonia vitripennis
NV10716
I
RPRC006485
Rhodnius prolixus
RPRC006485
I
SPU_006583
Strongylocentrotus purpuratus
SPU_006583
I
tetur09g05570
Tetranychus urticae
tetur09g05570
I
Aan_R004657
Calypte anna
Aan_R004657
I
Afo_R002778
Aptenodytes forsteri
Afo_R002778
I
Alligator_sinensis_CCG019430.1
Alligator sinensis
Alligator_sinensis_CCG019430.1
I
Cmyd_10006239
Chelonia mydas
Cmyd_10006239
I
ENSBTAP00000048182-D1
Bos grunniens
ENSBTAP00000048182-D1
I
ENSP00000264444-D1
Bos grunniens
ENSP00000264444-D1
I
ENSP00000264444
Macaca fascicularis
ENSP00000264444
I
ENSP00000331152
Macaca fascicularis
ENSP00000331152
I
Gfo_R002259
Geospiza fortis
Gfo_R002259
I
Myotis_brandtii_Mxi1_10027965
Myotis brandtii
Myotis_brandtii_Mxi1_10027965
I
Ogr05439
Ophisaurus gracilis
Ogr05439
I
Ogr11151
Ophisaurus gracilis
Ogr11151
I
Pvit_06637
Pogona vitticeps
Pvit_06637
I
Pvit_07222
Pogona vitticeps
Pvit_07222
I
Tal_R006513
Tyto alba
Tal_R006513
I
fgenesh2_pg.scaffold_205000025
Branchiostoma floridae
fgenesh2_pg.scaffold_205000025
I
Sakowv30007563m.g
Saccoglossus kowalevskii
Sakowv30007563m.g
I
mxi1
Xenopus tropicalis
XB-GENE-493086
I
mxi1.L
Xenopus laevis
XB-GENE-865794
I