GRMZM2G110109 (Zea mays)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 GRMZM2G110109 T015015_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID3
M06695_2.00 		Arabidopsis thaliana
AAWWHNAAATYAAWW
WWTTRATTTNDWWTT		 Dap-seq
OMalley et al.(2016)
AT2G17410_col_a 		0.704 0.753
ARID6
M06694_2.00 		Arabidopsis thaliana
HAATTRAWTTN
NAAWTYAATTD		 Dap-seq
OMalley et al.(2016)
AT1G20910_col_a 		0.609 0.718
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G110109_P01 ARID/BRIGHT 182 267

Links

Other ARID/BRIGHT family TFs
Other Zea mays TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000289018 Malus domestica MDP0000289018 I
Sb09g021770 Sorghum bicolor Sb09g021770 N
OPUNC05G16000 Oryza punctata OPUNC05G16000 N
ORGLA01G0320500 Oryza glaberrima ORGLA01G0320500 N
ORGLA05G0157700 Oryza glaberrima ORGLA05G0157700 N
ORUFI05G19330 Oryza rufipogon ORUFI05G19330 N
ORUFI05G19340 Oryza rufipogon ORUFI05G19340 N
OS01G0863300 Oryza sativa OS01G0863300 N
OS05G0442400 Oryza sativa OS05G0442400 N
Sb03g040730 Sorghum bicolor Sb03g040730 N
OPUNC01G36990 Oryza punctata OPUNC01G36990 N
Si003047m.g Setaria italica Si003047m.g N
Si023363m.g Setaria italica Si023363m.g N
TRAES3BF019300020CFD_g Triticum aestivum TRAES3BF019300020CFD_g N
Pavir.Ea03744 Panicum virgatum Pavir.Ea03744 N
Pavir.J02275 Panicum virgatum Pavir.J02275 N
Pavir.J08778 Panicum virgatum Pavir.J08778 N
LPERR05G14380 Leersia perrieri LPERR05G14380 N
BGIOSGA017964 Oryza indica BGIOSGA017964 N
BGIOSGA017965 Oryza indica BGIOSGA017965 N
BRADI2G55797 Brachypodium distachyon BRADI2G55797 N
F775_31610 Aegilops tauschii F775_31610 N
GRMZM2G027914 Zea mays GRMZM2G027914 N
GRMZM2G091201 Zea mays GRMZM2G091201 N
GRMZM2G143640 Zea mays GRMZM2G143640 N
LPERR01G32800 Leersia perrieri LPERR01G32800 N
BGIOSGA004852 Oryza indica BGIOSGA004852 N
OBART01G38220 Oryza barthii OBART01G38220 N
OGLUM01G42400 Oryza glumaepatula OGLUM01G42400 N
OGLUM05G19230 Oryza glumaepatula OGLUM05G19230 N
OGLUM05G19240 Oryza glumaepatula OGLUM05G19240 N
OMERI01G35110 Oryza meridionalis OMERI01G35110 N
ONIVA01G42920 Oryza nivara ONIVA01G42920 N
ONIVA05G19090 Oryza nivara ONIVA05G19090 N