OB02G37240 (Oryza brachyantha)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 OB02G37240 T015316_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID3
M06695_2.00 		Arabidopsis thaliana
AAWWHNAAATYAAWW
WWTTRATTTNDWWTT		 Dap-seq
OMalley et al.(2016)
AT2G17410_col_a 		0.704 0.753
ARID6
M06694_2.00 		Arabidopsis thaliana
HAATTRAWTTN
NAAWTYAATTD		 Dap-seq
OMalley et al.(2016)
AT1G20910_col_a 		0.609 0.718
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB02G37240.1 ARID/BRIGHT 81 166

Links

Other ARID/BRIGHT family TFs
Other Oryza brachyantha TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
augustus_masked-nMf.1.1.scaf10960-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf10960-processed-gene-0.0 I
ISCW014189 Ixodes scapularis ISCW014189 I
MhA1_Contig163.frz3.gene26 Meloidogyne hapla MhA1_Contig163.frz3.gene26 I
LDEC011073 Leptinotarsa decemlineata LDEC011073 I
SMAR003184 Strigamia maritima SMAR003184 I
SMAR006121 Strigamia maritima SMAR006121 I
GPLIN_000077900 Globodera pallida GPLIN_000077900 N
L892_g19705 Steinernema scapterisci L892_g19705 N
L889_g180 Steinernema feltiae L889_g180 N
L596_g4117 Steinernema carpocapsae L596_g4117 N
HPLM_0000291901 Haemonchus placei HPLM_0000291901 N
HPBE_0000983501 Heligmosomoides bakeri HPBE_0000983501 N
HCOI00324200 Haemonchus contortus HCOI00324200 N
GPUH_0000112301 Gongylonema pulchrum GPUH_0000112301 N
L898_g7337 Steinernema monticolum L898_g7337 N
EVEC_0000024601 Enterobius vermicularis EVEC_0000024601 N
EEL_0001008901 Elaeophora elaphi EEL_0001008901 N
DME_0001005001 Dracunculus medinensis DME_0001005001 N
D918_04368 Trichuris suis D918_04368 N
D917_06367 Trichinella nativa D917_06367 N
BXY_0663500 Bursaphelenchus xylophilus BXY_0663500 N
BTMF_0001195401 Brugia timori BTMF_0001195401 N
ANCDUO_04788 Ancylostoma duodenale ANCDUO_04788 N
ANCCEY_03110 Ancylostoma ceylanicum ANCCEY_03110 N
PEQ_0000742201 Parascaris equorum PEQ_0000742201 N
TMUE_s0224000200 Trichuris muris TMUE_s0224000200 N
TELCIR_03263 Teladorsagia circumcincta TELCIR_03263 N
TCNE_0000128301 Toxocara canis TCNE_0000128301 N
SVE_1830100 Strongyloides venezuelensis SVE_1830100 N
SSTP_0000977600 Strongyloides stercoralis SSTP_0000977600 N
SPAL_0001124500 Strongyloides papillosus SPAL_0001124500 N
scaffold2015-EXSNAP2012.2 Pristionchus exspectatus scaffold2015-EXSNAP2012.2 N
SBAD_0000668001 Soboliphyme baturini SBAD_0000668001 N
RSKR_0000271300 Rhabditophanes kr3021 RSKR_0000271300 N
PTRK_0001699800 Parastrongyloides trichosuri PTRK_0001699800 N
L893_g29191 Steinernema glaseri L893_g29191 N
OFLC_0001383401 Onchocerca flexuosa OFLC_0001383401 N
OESDEN_04600 Oesophagostomum dentatum OESDEN_04600 N
nOo.2.0.1.g08403 Onchocerca ochengi nOo.2.0.1.g08403 N
nLs.2.1.2.g09434 Litomosoides sigmodontis nLs.2.1.2.g09434 N
NECAME_01002 Necator americanus NECAME_01002 N
nDi.2.2.2.g04479 Dirofilaria immitis nDi.2.2.2.g04479 N
NBR_0002081701 Nippostrongylus brasiliensis NBR_0002081701 N
nAv.1.0.1.g00338 Acanthocheilonema viteae nAv.1.0.1.g00338 N
ASTEI11512 Anopheles stephensi ASTEI11512 N
osa Drosophila yakuba FBgn0041640 N
osa Drosophila melanogaster FBgn0261885 N
GA26236 Drosophila pseudoobscura FBgn0247610 N
GK22507 Drosophila willistoni FBgn0224484 N
GJ24712 Drosophila virilis FBgn0211788 N
GM15347 Drosophila sechellia FBgn0170267 N
GI23637 Drosophila mojavensis FBgn0146363 N
GH15872 Drosophila grimshawi FBgn0123343 N
GG16758 Drosophila erecta FBgn0108988 N
GF23141 Drosophila ananassae FBgn0100135 N
GB44899 Apis mellifera GB44899 N
EFV52694 Trichinella spiralis EFV52694 N
CRE29533 Caenorhabditis remanei CRE29533 N
CJA11729 Caenorhabditis japonica CJA11729 N
CBN07938 Caenorhabditis brenneri CBN07938 N
CBG12337 Caenorhabditis briggsae CBG12337 N
Bm1891 Brugia malayi Bm1891 N
BGIBMGA010273 Bombyx mori BGIBMGA010273 N
ACEP26642 Atta cephalotes ACEP26642 N
AAEL017280 Aedes aegypti AAEL017280 N
Cflo_01219--XP_395512.3_APIME Camponotus floridanus Cflo_01219--XP_395512.3_APIME N
PPAI002183 Phlebotomus papatasi PPAI002183 N
WUBG_00477 Wuchereria bancrofti WUBG_00477 N
AMEM013442 Anopheles merus AMEM013442 N
AFUN009891 Anopheles funestus AFUN009891 N
AFAF010393 Anopheles farauti AFAF010393 N
LCUP015823 Lucilia cuprina LCUP015823 N
HHAL005964-PA Halyomorpha halys HHAL005964-PA N
CLEC012210 Cimex lectularius CLEC012210 N
Hsal_01939--XP_395512.3_APIME Harpegnathos saltator Hsal_01939--XP_395512.3_APIME N
ANCCAN_09492 Ancylostoma caninum ANCCAN_09492 N
YQE_09239 Dendroctonus ponderosae YQE_09239 N
WBGene00237224 Onchocerca volvulus WBGene00237224 N
let-526 Caenorhabditis elegans WBGene00002717 N
TC013586 Tribolium castaneum TC013586 N
SINV22763 Solenopsis invicta SINV22763 N
PPA05721 Pristionchus pacificus PPA05721 N
PHUM080380 Pediculus humanus PHUM080380 N
LOAG_17326 Loa loa LOAG_17326 N
KGM_12579 Danaus plexippus KGM_12579 N