MDP0000188323 (Malus domestica)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 MDP0000188323 T016141_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID3
M06695_2.00 		Arabidopsis thaliana
AAWWHNAAATYAAWW
WWTTRATTTNDWWTT		 Dap-seq
OMalley et al.(2016)
AT2G17410_col_a 		0.747 0.835
ARID6
M06694_2.00 		Arabidopsis thaliana
HAATTRAWTTN
NAAWTYAATTD		 Dap-seq
OMalley et al.(2016)
AT1G20910_col_a 		0.629 0.729
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000188323 ARID/BRIGHT 227 312

Links

Other ARID/BRIGHT family TFs
Other Malus domestica TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bcin02g05460 Botrytis cinerea Bcin02g05460 I
HMPREF1624_04642 Sporothrix schenckii HMPREF1624_04642 I
SBOR_8128 Sclerotinia borealis SBOR_8128 I
TRIATDRAFT_37495 Trichoderma atroviride TRIATDRAFT_37495 I
TRIREDRAFT_51907 Trichoderma reesei TRIREDRAFT_51907 I
TRIVIDRAFT_114564 Trichoderma virens TRIVIDRAFT_114564 I
EURHEDRAFT_375153 Aspergillus ruber EURHEDRAFT_375153 N
PABG_07523 Paracoccidioides brasiliensis PABG_07523 N