Pavir.Ib01650 (Panicum virgatum)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 Pavir.Ib01650 T016169_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ib01650.1.p ARID/BRIGHT 89 186
Pavir.Ib01650.2.p ARID/BRIGHT 89 186
Pavir.Ib01650.3.p ARID/BRIGHT 89 186

Links

Other ARID/BRIGHT family TFs
Other Panicum virgatum TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA020494 Oryza indica BGIOSGA020494 N 0.448
BRADI1G29247 Brachypodium distachyon BRADI1G29247 N 0.542
GRMZM2G466292 Zea mays GRMZM2G466292 N 0.601
LPERR06G23820 Leersia perrieri LPERR06G23820 N 0.521
OB06G36110 Oryza brachyantha OB06G36110 N 0.537
OBART06G28370 Oryza barthii OBART06G28370 N 0.448
OGLUM06G29760 Oryza glumaepatula OGLUM06G29760 N 0.448
OLONG_013925 Oryza longistaminata OLONG_013925 N 0.425
OMERI06G28260 Oryza meridionalis OMERI06G28260 N 0.448
ONIVA06G31490 Oryza nivara ONIVA06G31490 N 0.448
ORGLA06G0289500 Oryza glaberrima ORGLA06G0289500 N 0.448
ORUFI06G30290 Oryza rufipogon ORUFI06G30290 N 0.448
OS06G0731600 Oryza sativa OS06G0731600 N 0.448
Sb10g031260 Sorghum bicolor Sb10g031260 N 0.623
Si005667m.g Setaria italica Si005667m.g N 0.695