SapurV1A.0047s0480 (Salix purpurea)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 SapurV1A.0047s0480 T016175_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID3
M06695_2.00 		Arabidopsis thaliana
AAWWHNAAATYAAWW
WWTTRATTTNDWWTT		 Dap-seq
OMalley et al.(2016)
AT2G17410_col_a 		0.663 0.765
ARID6
M06694_2.00 		Arabidopsis thaliana
HAATTRAWTTN
NAAWTYAATTD		 Dap-seq
OMalley et al.(2016)
AT1G20910_col_a 		0.573 0.706
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0047s0480.1.p ARID/BRIGHT 253 338
SapurV1A.0047s0480.2.p ARID/BRIGHT 253 338

Links

Other ARID/BRIGHT family TFs
Other Salix purpurea TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo00954s040 Brassica oleracea Bo00954s040 N
Bo1g101570 Brassica oleracea Bo1g101570 N
Bo2g119430 Brassica oleracea Bo2g119430 N
Bo3g073420 Brassica oleracea Bo3g073420 N
Bo4g162580 Brassica oleracea Bo4g162580 N
Bo5g111170 Brassica oleracea Bo5g111170 N
Bo5g128890 Brassica oleracea Bo5g128890 N
Bo6g008140 Brassica oleracea Bo6g008140 N
Bo7g090920 Brassica oleracea Bo7g090920 N
Bo7g104740 Brassica oleracea Bo7g104740 N
Bostr.19424s0975 Boechera stricta Bostr.19424s0975 N
Bostr.29863s0004 Boechera stricta Bostr.29863s0004 N