CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Thhalv10001382m.g
(
Eutrema salsugineum
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
Thhalv10001382m.g
T016184_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10001382m
ARID/BRIGHT
45
128
IEELASLFQRLLESFIGEFCSADSLPPMTGDRRAVNLFILFVNVSHRGGFDAVASWDEVAQESGLGFNNSASAKLSYAKYLDAL
Links
Other
ARID/BRIGHT
family TFs
Other
Eutrema salsugineum
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT2G46040
Arabidopsis thaliana
AT2G46040
N
0.428
Bo4g196010
Brassica oleracea
Bo4g196010
N
0.591
Bra039294
Brassica rapa
Bra039294
N
0.537
LPERR10G08380
Leersia perrieri
LPERR10G08380
N
0.440
OB10G19040
Oryza brachyantha
OB10G19040
N
0.440
Si038535m.g
Setaria italica
Si038535m.g
N
0.441
Bostr.25993s0166
Boechera stricta
Bostr.25993s0166
N
0.482
Cagra.0050s0094
Capsella grandiflora
Cagra.0050s0094
N
0.447
Carubv10022904m.g
Capsella rubella
Carubv10022904m.g
N
0.447