CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NCU03892
(
Neurospora crassa
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
NCU03892
T016222_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU03892
M01670_2.00
Neurospora crassa
HAAATTTD
HAAATTTD
PBM
Weirauch et al.(2014)
pTH8975
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.422
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01670_2.00
ARID/BRIGHT
19
107
EYEKFIEDLRVFHEKRGTNFDPEPKMGNLTVDLLKLFKHIVEHGGYDKVSDEKLMWRKMCEGLGLMRHNAPADAYTLKQIFYKNLAAYE
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU03892
ARID/BRIGHT
19
107
EYEKFIEDLRVFHEKRGTNFDPEPKMGNLTVDLLKLFKHIVEHGGYDKVSDEKLMWRKMCEGLGLMRHNAPADAYTLKQIFYKNLAAYE
Links
Other
ARID/BRIGHT
family TFs
Other
Neurospora crassa
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000009860
Astyanax mexicanus
ENSAMXG00000009860
N
0.000
ENSPPYG00000002981
Pongo abelii
ENSPPYG00000002981
N
0.000
SINV16744
Solenopsis invicta
SINV16744
N
0.000
D915_00606
Fasciola hepatica
D915_00606
N
0.000