CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ENSONIG00000016976 *(Oreochromis niloticus)* AT hook
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF02178 (AT_hook)	IPR017956	ENSONIG00000016976	T017424_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
HMGA1 M09769_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HMGIY_01	0.991	0.895
HMGA1 M09770_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HMGIY_Q4	0.991	0.895
Hmga2 M00751_2.00	Mus musculus	NNNNRHWWNN	NNWWDYNNNN	PBM Weirauch et al.(2013) pTH3046	0.991	0.763
ENSPPYG00000004736 M01685_2.00	Pongo abelii	NNNNDWWW	WWWHNNNN	PBM Weirauch et al.(2014) pTH9279	0.991	0.763
HMGA2 M09771_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HMGA2_01	0.991	0.763
ANIA_01690 M01675_2.00	Aspergillus nidulans	NNNNRHDDN	NHHDYNNNN	PBM Weirauch et al.(2014) pTH8216	0.991	0.553
FGRRES_05233 M01104_2.00	Fusarium graminearum	NNNDWWAWWH	DWWTWWHNNN	PBM Lambert et al.(2019) pTH11377	0.991	0.526
HMG-I Y M02652_2.00	Pisum sativum	NDWVAAANRVMRWMAY	RTKWYKBYNTTTBWHN	SELEX Mathelier et al.(2014) MA0045.1	0.991	0.423
AHL13 M01672_2.00	Arabidopsis thaliana	NAWWTAWWWN	NWWWTAWWTN	PBM Weirauch et al.(2014) pTH8202	0.991	0.421
HMGA M01671_2.00	Arabidopsis thaliana	NNNNDWAWH	DWTWHNNNN	PBM Weirauch et al.(2014) pTH7395	0.991	0.404
BRADI3G55950 M01673_2.00	Brachypodium distachyon	NNNNRHDDN	NHHDYNNNN	PBM Weirauch et al.(2014) pTH9369	0.991	0.395
OS02G0824300 M01688_2.00	Oryza sativa	NNDWAWWN	NWWTWHNN	PBM Weirauch et al.(2014) pTH8406	0.991	0.395
VIT_08s0007g04020 M01689_2.00	Vitis vinifera	DBNDDDDDDN	NHHHHHHNVH	PBM Weirauch et al.(2014) pTH9295	0.991	0.395
TVAG_474020 M01106_2.00	Trichomonas vaginalis	DNWWWAWW	WWTWWWNH	PBM Lambert et al.(2019) pTH11493	0.991	0.395
NCU05635 M01694_2.00	Neurospora crassa	NNNWWWWNNN	NNNWWWWNNN	PBM Weirauch et al.(2014) pTH8863	0.991	0.395
NCU01145 M01693_2.00	Neurospora crassa	RWATAWWTNN	NNAWWTATWY	PBM Weirauch et al.(2014) pTH8916	0.991	0.387
SUM1 M07439_2.00	Saccharomyces cerevisiae	DWAAATWWN	NWWATTTWH	PBM, CSA and or DIP-chip Mathelier et al.(2014) MA0398.1	0.991	0.346
SUM1 M08478_2.00	Saccharomyces cerevisiae	RYGWCASWAAW	WTTWSTGWCRY	Misc DeBoer et al.(2011) YDR310C_383	0.991	0.346
SUM1 M08479_2.00	Saccharomyces cerevisiae	DWAAATWWN	NWWATTTWH	Misc DeBoer et al.(2011) YDR310C_478	0.991	0.346
FGRRES_17512 M01105_2.00	Fusarium graminearum	NNNDNWWWW	WWWWNHNNN	PBM Lambert et al.(2019) pTH11412	0.991	0.342
SUM1 M00008_2.00	Saccharomyces cerevisiae	NNDWWWH	DWWWHNN	PBM Badis et al.(2008) SUM1_2124	0.991	0.342
Q7DLU9_PEA M09772_2.00	Pisum sativum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$HMGIY_01	0.991	0.342
athp-3 M01691_2.00	Caenorhabditis elegans	NNDDWDH	DHWHHNN	PBM Weirauch et al.(2014) pTH9097	0.991	0.339
hmg-12 M01690_2.00	Caenorhabditis elegans	NNAWWTAWWTNN	NNAWWTAWWTNN	PBM Weirauch et al.(2014) pTH8997	0.991	0.222
BRADI5G22430 M01674_2.00	Brachypodium distachyon	VNRDDDHDD	HHDHHHYNB	PBM Weirauch et al.(2014) pTH9242	0.991	0.211
kmt2cb M01679_2.00	Danio rerio	WWAWAWAT	ATWTWTWW	PBM Weirauch et al.(2014) pTH7876	0.991	0.211
Setbp1 M01683_2.00	Mus musculus	NDNNNNNNHN	NDNNNNNNHN	PBM Weirauch et al.(2014) pTH1294	0.991	0.211
PK26376.1 M01108_2.00	Cannabis sativa	DDWWWAWW	WWTWWWHH	PBM Lambert et al.(2019) pTH11261	0.991	0.211
Ahctf1 M00750_2.00	Mus musculus	AAAWAWAW	ATWTWTTT	PBM Weirauch et al.(2013) pTH2361	0.991	0.184
Xrp1 M01686_2.00	Drosophila melanogaster	NNNNDWAWW	WWTWHNNNN	PBM Weirauch et al.(2014) pTH9260	0.991	0.184
MTR_4g101990 M01687_2.00	Medicago truncatula	AAAWTAAT	ATTAWTTT	PBM Weirauch et al.(2014) pTH9209	0.991	0.184
estExt_fgeneshNG_pg.C_820014 M01692_2.00	Naegleria gruberi	NNNNNDRH	DYHNNNNN	PBM Weirauch et al.(2014) pTH9380	0.991	0.184
PK00377.1 M01107_2.00	Cannabis sativa	DAWWWAWW	WWTWWWTH	PBM Lambert et al.(2019) pTH11338	0.991	0.184
Xrp1 M05900_2.00	Drosophila melanogaster	RTKRYGYAAT	ATTRCRYMAY	B1H Zhu et al.(2011) Xrp1_CG6272_SANGER_5_FBgn0261113	0.991	0.184
ATEG_07399 M01676_2.00	Aspergillus terreus	DHNNHNDWWW	WWWHNDNNDH	PBM Weirauch et al.(2014) pTH9237	0.991	0.158
ENSACAG00000014978 M01677_2.00	Anolis carolinensis	NNNNNDRH	DYHNNNNN	PBM Weirauch et al.(2014) pTH9222	0.991	0.158
phf21ab M01678_2.00	Danio rerio	NNNDNADW	WHTNHNNN	PBM Weirauch et al.(2014) pTH9254	0.991	0.158
phf21ab M01680_2.00	Gasterosteus aculeatus	AAAAWAAA	TTTWTTTT	PBM Weirauch et al.(2014) pTH9180	0.991	0.158
PHF21A M01681_2.00	Meleagris gallopavo	HDNHNNDNHD	HDNHNNDNHD	PBM Weirauch et al.(2014) pTH7875	0.991	0.158
PHF21A M01103_2.00	Monodelphis domestica	NNNAWATWAATN	NATTWATWTNNN	PBM Lambert et al.(2019) pTH9309	0.991	0.158
PHF21A M01682_2.00	Monodelphis domestica	NNNNNHRH	DYDNNNNN	PBM Weirauch et al.(2014) pTH9335	0.991	0.158
Phf21a M01684_2.00	Mus musculus	NNNATATWAATN	NATTWATATNNN	PBM Weirauch et al.(2014) pTH8550	0.991	0.158
SUM1 M01517_2.00	Saccharomyces cerevisiae	NNNDWAWW	WWTWHNNN	PBM Zhu et al.(2009) Sum1	0.991	0.000
For this family, TFs with SR scores > 0.990* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSONIP00000021408	AT hook	23	34	KRGRGRPRKQPQ
ENSONIP00000021408	AT hook	55	67	KRPRGRPKGSKNK
ENSONIP00000021408	AT hook	83	95	GKRRGRPKKEEKE

Links
Other AT hook family TFs
Other *Oreochromis niloticus* TFs

1072 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
HCBG_05620	Histoplasma capsulatum	HCBG_05620	D
PV11_00872	Exophiala sideris	PV11_00872	I
MCYG_00576	Microsporum canis	MCYG_00576	I
PABG_06482	Paracoccidioides brasiliensis	PABG_06482	I
PDE_03379	Penicillium oxalicum	PDE_03379	I
PMAA_018530	Talaromyces marneffei	PMAA_018530	I
PV05_05708	Exophiala xenobiotica	PV05_05708	I
PV06_02748	Exophiala oligosperma	PV06_02748	I
PV07_06716	Cladophialophora immunda	PV07_06716	I
PV08_11124	Exophiala spinifera	PV08_11124	I
PV10_05482	Exophiala mesophila	PV10_05482	I
MGYG_01386	Microsporum gypseum	MGYG_01386	I
TEQG_05447	Trichophyton equinum	TEQG_05447	I
TESG_05799	Trichophyton tonsurans	TESG_05799	I
TSTA_026540	Talaromyces stipitatus	TSTA_026540	I
V499_05047	Pseudogymnoascus pannorum	V499_05047	I
VHEMI07137	Torrubiella hemipterigena	VHEMI07137	I
Z517_10389	Fonsecaea pedrosoi	Z517_10389	I
Z518_01320	Rhinocladiella mackenziei	Z518_01320	I
Z519_02267	Cladophialophora bantiana	Z519_02267	I
PMAA_018530	Penicillium marneffei	PMAA_018530	I
EV44_g6223	Erysiphe necator	EV44_g6223	I
A1O1_08709	Capronia coronata	A1O1_08709	I
A1O3_08094	Capronia epimyces	A1O3_08094	I
A1O7_03387	Cladophialophora yegresii	A1O7_03387	I
A1O9_03458	Exophiala aquamarina	A1O9_03458	I
A1O9_12959	Exophiala aquamarina	A1O9_12959	I
ARB_01992	Arthroderma benhamiae	ARB_01992	I
BDDG_07136	Blastomyces dermatitidis	BDDG_07136	I
EPUS_04902	Endocarpon pusillum	EPUS_04902	I
MCYG_00576	Arthroderma otae	MCYG_00576	I
G647_04998	Cladophialophora carrionii	G647_04998	I
GMDG_06896	Pseudogymnoascus destructans	GMDG_06896	I
H072_5617	Dactylellina haptotyla	H072_5617	I
H101_06341	Trichophyton interdigitale	H101_06341	I
H102_07503	Trichophyton rubrum	H102_07503	I
H105_07531	Trichophyton soudanense	H105_07531	I
HMPREF1120_04468	Exophiala dermatitidis	HMPREF1120_04468	I
HMPREF1541_04403	Cyphellophora europaea	HMPREF1541_04403	I
S40288_07681	Stachybotrys chartarum	S40288_07681	N
Bcin09g01580	Botrytis cinerea	Bcin09g01580	N
PV04_03585	Capronia semiimmersa	PV04_03585	N

ENSONIG00000016976 (Oreochromis niloticus) AT hook

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1072 Related TFs

ENSONIG00000016976 **(Oreochromis niloticus)
AT hook**