CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SPAL_0001764700
(
Strongyloides papillosus
)
AT hook
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02178 (AT_hook)
IPR017956
SPAL_0001764700
T018229_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AHL13
M01672_2.00
Arabidopsis thaliana
NAWWTAWWWN
NWWWTAWWTN
PBM
Weirauch et al.(2014)
pTH8202
0.991
0.520
BRADI3G55950
M01673_2.00
Brachypodium distachyon
NNNNRHDDN
NHHDYNNNN
PBM
Weirauch et al.(2014)
pTH9369
0.991
0.520
FGRRES_17512
M01105_2.00
Fusarium graminearum
NNNDNWWWW
WWWWNHNNN
PBM
Lambert et al.(2019)
pTH11412
0.991
0.520
OS02G0824300
M01688_2.00
Oryza sativa
NNDWAWWN
NWWTWHNN
PBM
Weirauch et al.(2014)
pTH8406
0.991
0.520
VIT_08s0007g04020
M01689_2.00
Vitis vinifera
DBNDDDDDDN
NHHHHHHNVH
PBM
Weirauch et al.(2014)
pTH9295
0.991
0.520
TVAG_474020
M01106_2.00
Trichomonas vaginalis
DNWWWAWW
WWTWWWNH
PBM
Lambert et al.(2019)
pTH11493
0.991
0.520
Q7DLU9_PEA
M09772_2.00
Pisum sativum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$HMGIY_01
0.991
0.480
SUM1
M00008_2.00
Saccharomyces cerevisiae
NNDWWWH
DWWWHNN
PBM
Badis et al.(2008)
SUM1_2124
0.991
0.440
SUM1
M07439_2.00
Saccharomyces cerevisiae
DWAAATWWN
NWWATTTWH
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0398.1
0.991
0.423
SUM1
M08478_2.00
Saccharomyces cerevisiae
RYGWCASWAAW
WTTWSTGWCRY
Misc
DeBoer et al.(2011)
YDR310C_383
0.991
0.423
SUM1
M08479_2.00
Saccharomyces cerevisiae
DWAAATWWN
NWWATTTWH
Misc
DeBoer et al.(2011)
YDR310C_478
0.991
0.423
NCU05635
M01694_2.00
Neurospora crassa
NNNWWWWNNN
NNNWWWWNNN
PBM
Weirauch et al.(2014)
pTH8863
0.991
0.368
ANIA_01690
M01675_2.00
Aspergillus nidulans
NNNNRHDDN
NHHDYNNNN
PBM
Weirauch et al.(2014)
pTH8216
0.991
0.324
Setbp1
M01683_2.00
Mus musculus
NDNNNNNNHN
NDNNNNNNHN
PBM
Weirauch et al.(2014)
pTH1294
0.991
0.320
PK26376.1
M01108_2.00
Cannabis sativa
DDWWWAWW
WWTWWWHH
PBM
Lambert et al.(2019)
pTH11261
0.991
0.320
ENSPPYG00000004736
M01685_2.00
Pongo abelii
NNNNDWWW
WWWHNNNN
PBM
Weirauch et al.(2014)
pTH9279
0.991
0.316
Hmga2
M00751_2.00
Mus musculus
NNNNRHWWNN
NNWWDYNNNN
PBM
Weirauch et al.(2013)
pTH3046
0.991
0.308
FGRRES_05233
M01104_2.00
Fusarium graminearum
NNNDWWAWWH
DWWTWWHNNN
PBM
Lambert et al.(2019)
pTH11377
0.991
0.308
HMGA2
M09771_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HMGA2_01
0.991
0.308
HMGA1
M09769_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HMGIY_01
0.991
0.308
HMGA1
M09770_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HMGIY_Q4
0.991
0.308
BRADI5G22430
M01674_2.00
Brachypodium distachyon
VNRDDDHDD
HHDHHHYNB
PBM
Weirauch et al.(2014)
pTH9242
0.991
0.280
ATEG_07399
M01676_2.00
Aspergillus terreus
DHNNHNDWWW
WWWHNDNNDH
PBM
Weirauch et al.(2014)
pTH9237
0.991
0.280
ENSACAG00000014978
M01677_2.00
Anolis carolinensis
NNNNNDRH
DYHNNNNN
PBM
Weirauch et al.(2014)
pTH9222
0.991
0.280
phf21ab
M01678_2.00
Danio rerio
NNNDNADW
WHTNHNNN
PBM
Weirauch et al.(2014)
pTH9254
0.991
0.280
kmt2cb
M01679_2.00
Danio rerio
WWAWAWAT
ATWTWTWW
PBM
Weirauch et al.(2014)
pTH7876
0.991
0.280
phf21ab
M01680_2.00
Gasterosteus aculeatus
AAAAWAAA
TTTWTTTT
PBM
Weirauch et al.(2014)
pTH9180
0.991
0.280
PHF21A
M01681_2.00
Meleagris gallopavo
HDNHNNDNHD
HDNHNNDNHD
PBM
Weirauch et al.(2014)
pTH7875
0.991
0.280
PHF21A
M01103_2.00
Monodelphis domestica
NNNAWATWAATN
NATTWATWTNNN
PBM
Lambert et al.(2019)
pTH9309
0.991
0.280
PHF21A
M01682_2.00
Monodelphis domestica
NNNNNHRH
DYDNNNNN
PBM
Weirauch et al.(2014)
pTH9335
0.991
0.280
Ahctf1
M00750_2.00
Mus musculus
AAAWAWAW
ATWTWTTT
PBM
Weirauch et al.(2013)
pTH2361
0.991
0.280
Phf21a
M01684_2.00
Mus musculus
NNNATATWAATN
NATTWATATNNN
PBM
Weirauch et al.(2014)
pTH8550
0.991
0.280
Xrp1
M01686_2.00
Drosophila melanogaster
NNNNDWAWW
WWTWHNNNN
PBM
Weirauch et al.(2014)
pTH9260
0.991
0.280
MTR_4g101990
M01687_2.00
Medicago truncatula
AAAWTAAT
ATTAWTTT
PBM
Weirauch et al.(2014)
pTH9209
0.991
0.280
PK00377.1
M01107_2.00
Cannabis sativa
DAWWWAWW
WWTWWWTH
PBM
Lambert et al.(2019)
pTH11338
0.991
0.280
Xrp1
M05900_2.00
Drosophila melanogaster
RTKRYGYAAT
ATTRCRYMAY
B1H
Zhu et al.(2011)
Xrp1_CG6272_SANGER_5_FBgn0261113
0.991
0.280
HMG-I Y
M02652_2.00
Pisum sativum
NDWVAAANRVMRWMAY
RTKWYKBYNTTTBWHN
SELEX
Mathelier et al.(2014)
MA0045.1
0.991
0.250
estExt_fgeneshNG_pg.C_820014
M01692_2.00
Naegleria gruberi
NNNNNDRH
DYHNNNNN
PBM
Weirauch et al.(2014)
pTH9380
0.991
0.240
HMGA
M01671_2.00
Arabidopsis thaliana
NNNNDWAWH
DWTWHNNNN
PBM
Weirauch et al.(2014)
pTH7395
0.991
0.231
athp-3
M01691_2.00
Caenorhabditis elegans
NNDDWDH
DHWHHNN
PBM
Weirauch et al.(2014)
pTH9097
0.991
0.194
NCU01145
M01693_2.00
Neurospora crassa
RWATAWWTNN
NNAWWTATWY
PBM
Weirauch et al.(2014)
pTH8916
0.991
0.177
hmg-12
M01690_2.00
Caenorhabditis elegans
NNAWWTAWWTNN
NNAWWTAWWTNN
PBM
Weirauch et al.(2014)
pTH8997
0.991
0.136
SUM1
M01517_2.00
Saccharomyces cerevisiae
NNNDWAWW
WWTWHNNN
PBM
Zhu et al.(2009)
Sum1
0.991
0.000
For this family, TFs with SR scores >
0.990
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SPAL_0001764700.2
AT hook
835
846
KKRGRPKKVNEQ
SPAL_0001764700.2
AT hook
878
890
KRTRGRPKKTIST
Links
Other
AT hook
family TFs
Other
Strongyloides papillosus
TFs
1072 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NEMVEDRAFT_v1g136480
Nematostella vectensis
NEMVEDRAFT_v1g136480
D
Pax6
Mus musculus
ENSMUSG00000027168
D
ey
Drosophila melanogaster
FBgn0005558
D
CpipJ_CPIJ014198
Culex pipiens
CpipJ_CPIJ014198
I
WUBG_04585
Wuchereria bancrofti
WUBG_04585
I
ACEP15305
Atta cephalotes
ACEP15305
I
ACEP19559
Atta cephalotes
ACEP19559
I
ACYPI067723
Acyrthosiphon pisum
ACYPI067723
I
BGIBMGA009546
Bombyx mori
BGIBMGA009546
I
Bm3369
Brugia malayi
Bm3369
I
CapteG228124
Capitella teleta
CapteG228124
I
CBG04483
Caenorhabditis briggsae
CBG04483
I
CJA11736
Caenorhabditis japonica
CJA11736
I
CPIJ014198
Culex quinquefasciatus
CPIJ014198
I
DAPPUDRAFT_9094
Daphnia pulex
DAPPUDRAFT_9094
I
ENSACAG00000013797
Anolis carolinensis
ENSACAG00000013797
I
ENSAMXG00000010055
Astyanax mexicanus
ENSAMXG00000010055
I
ENSAMXG00000021103
Astyanax mexicanus
ENSAMXG00000021103
I
ENSAPLG00000011062
Anas platyrhynchos
ENSAPLG00000011062
I
PAX6
Choloepus hoffmanni
ENSCHOG00000001954
I
pax3/7-like
Ciona intestinalis
ENSCING00000013561
I
ENSCSAVG00000005353
Ciona savignyi
ENSCSAVG00000005353
I
pax10
Danio rerio
ENSDARG00000053364
I
Pax3
Dipodomys ordii
ENSDORG00000010324
I
PAX6
Erinaceus europaeus
ENSEEUG00000014014
I
pax10
Gasterosteus aculeatus
ENSGACG00000007835
I
ENSGMOG00000007260
Gadus morhua
ENSGMOG00000007260
I
ENSLOCG00000017168
Lepisosteus oculatus
ENSLOCG00000017168
I
ENSMGAG00000001533
Meleagris gallopavo
ENSMGAG00000001533
I
ENSMGAG00000004645
Meleagris gallopavo
ENSMGAG00000004645
I
ENSMLUG00000002244
Myotis lucifugus
ENSMLUG00000002244
I
ENSONIG00000020082
Oreochromis niloticus
ENSONIG00000020082
I
ENSPFOG00000004477
Poecilia formosa
ENSPFOG00000004477
I
ENSPFOG00000006769
Poecilia formosa
ENSPFOG00000006769
I
ENSPPYG00000029808
Pongo abelii
ENSPPYG00000029808
I
PAX3
Vicugna pacos
ENSVPAG00000000715
I
ENSXMAG00000017245
Xiphophorus maculatus
ENSXMAG00000017245
I
HMEL012214
Heliconius melpomene
HMEL012214
I
KGM_00017
Danaus plexippus
KGM_00017
I
KGM_18864
Danaus plexippus
KGM_18864
I
LOAG_18403
Loa loa
LOAG_18403
I
LotgiG80560
Lottia gigantea
LotgiG80560
I
MESCA001873
Megaselia scalaris
MESCA001873
I
NEMVEDRAFT_v1g119152
Nematostella vectensis
NEMVEDRAFT_v1g119152
I
PHUM217100
Pediculus humanus
PHUM217100
I
Ppa-ceh-8
Pristionchus pacificus
PPA03443
I
SINV15875
Solenopsis invicta
SINV15875
I
SMAR006838
Strigamia maritima
SMAR006838
I
SPU_006787
Strongylocentrotus purpuratus
SPU_006787
I
WBGene00241133
Onchocerca volvulus
WBGene00241133
I
YQE_05108
Dendroctonus ponderosae
YQE_05108
I
YQE_06850
Dendroctonus ponderosae
YQE_06850
I
YQE_12757
Dendroctonus ponderosae
YQE_12757
I
YQE_12760
Dendroctonus ponderosae
YQE_12760
I
Brh_R002767
Buceros rhinoceros
Brh_R002767
I
Cflo_06474--XP_394848.3_APIME
Camponotus floridanus
Cflo_06474--XP_394848.3_APIME
I
Cmyd_10010531
Chelonia mydas
Cmyd_10010531
I
Tal_R002183
Tyto alba
Tal_R002183
I
Tal_R002397
Tyto alba
Tal_R002397
I
Ocbimv22007835m.g
Octopus bimaculoides
Ocbimv22007835m.g
I
Ocbimv22021713m.g
Octopus bimaculoides
Ocbimv22021713m.g
I
CLEC008732
Cimex lectularius
CLEC008732
I
CLEC009744
Cimex lectularius
CLEC009744
I
HHAL001220-PA
Halyomorpha halys
HHAL001220-PA
I
HHAL002779-PA
Halyomorpha halys
HHAL002779-PA
I
LCUP011798
Lucilia cuprina
LCUP011798
I
LCUP013026
Lucilia cuprina
LCUP013026
I
LCUP015672
Lucilia cuprina
LCUP015672
I
LDEC009603
Leptinotarsa decemlineata
LDEC009603
I
LDEC011614
Leptinotarsa decemlineata
LDEC011614
I
SNAPOd2T00015303001
Oikopleura dioica
SNAPOd2T00015303001
I
XP_002938577
Xenopus tropicalis
XP_002938577
I
AALB001245
Anopheles albimanus
AALB001245
I
AARA005848
Anopheles arabiensis
AARA005848
I
ACHR005004
Anopheles christyi
ACHR005004
I
ACHR007975
Anopheles christyi
ACHR007975
I
ACUA006364
Anopheles culicifacies
ACUA006364
I
ACUA016236
Anopheles culicifacies
ACUA016236
I
ADIR009742
Anopheles dirus
ADIR009742
I
AEPI007688
Anopheles epiroticus
AEPI007688
I
AEPI009864
Anopheles epiroticus
AEPI009864
I
AFAF020744
Anopheles farauti
AFAF020744
I
AFUN002667
Anopheles funestus
AFUN002667
I
AFUN004920
Anopheles funestus
AFUN004920
I
AMAM010839
Anopheles maculatus
AMAM010839
I
AMAM022462
Anopheles maculatus
AMAM022462
I
AMEM005969
Anopheles merus
AMEM005969
I
AMIN006554
Anopheles minimus
AMIN006554
I
AQUA000003
Anopheles quadriannulatus
AQUA000003
I
AQUA006727
Anopheles quadriannulatus
AQUA006727
I
BGLB009051
Biomphalaria glabrata
BGLB009051
I
LLOJ006069
Lutzomyia longipalpis
LLOJ006069
I
PPAI007516
Phlebotomus papatasi
PPAI007516
I
A_06809
Schistosoma haematobium
A_06809
I
ANCCAN_00245
Ancylostoma caninum
ANCCAN_00245
I
ANCCEY_08415
Ancylostoma ceylanicum
ANCCEY_08415
I
ANCDUO_04304
Ancylostoma duodenale
ANCDUO_04304
I
ASU_08111
Ascaris suum
ASU_08111
I
BTMF_0001218901
Brugia timori
BTMF_0001218901
I
CGOC_0000172601
Cylicostephanus goldi
CGOC_0000172601
I
D915_05710
Fasciola hepatica
D915_05710
I
ECPE_0000989001
Echinostoma caproni
ECPE_0000989001
I
EVEC_0000950501
Enterobius vermicularis
EVEC_0000950501
I
GPUH_0000746301
Gongylonema pulchrum
GPUH_0000746301
I
HPLM_0000341801
Haemonchus placei
HPLM_0000341801
I
L889_g29911
Steinernema feltiae
L889_g29911
I
L893_g1042
Steinernema glaseri
L893_g1042
I
L898_g33070
Steinernema monticolum
L898_g33070
I
nAv.1.0.1.g05049
Acanthocheilonema viteae
nAv.1.0.1.g05049
I
NBR_0001845501
Nippostrongylus brasiliensis
NBR_0001845501
I
nDi.2.2.2.g03676
Dirofilaria immitis
nDi.2.2.2.g03676
I
NECAME_04523
Necator americanus
NECAME_04523
I
nLs.2.1.2.g01340
Litomosoides sigmodontis
nLs.2.1.2.g01340
I
nOo.2.0.1.g09807
Onchocerca ochengi
nOo.2.0.1.g09807
I
nRc.2.0.1.g25805
Romanomermis culicivorax
nRc.2.0.1.g25805
I
OESDEN_03125
Oesophagostomum dentatum
OESDEN_03125
I
OFLC_0000197901
Onchocerca flexuosa
OFLC_0000197901
I
SMTD_0001329401
Schistosoma mattheei
SMTD_0001329401
I
SMUV_0001111201
Syphacia muris
SMUV_0001111201
I
SROB_0000988801
Schistosoma rodhaini
SROB_0000988801
I
TCLT_0000211001
Thelazia callipaeda
TCLT_0000211001
I
TELCIR_00312
Teladorsagia circumcincta
TELCIR_00312
I
TRE_0000697601
Trichobilharzia regenti
TRE_0000697601
I
ENSCSAVG00000004794
Ciona savignyi
ENSCSAVG00000004794
I
vab-3
Caenorhabditis elegans
WBGene00006870
I
L596_g12356
Steinernema carpocapsae
L596_g12356
I
PRRX1
Pteropus vampyrus
ENSPVAG00000007390
N
ENSTNIG00000000660
Tetraodon nigroviridis
ENSTNIG00000000660
N
Smp_142440
Schistosoma mansoni
Smp_142440
N
WBGene00247364
Onchocerca volvulus
WBGene00247364
N
A_02894
Schistosoma haematobium
A_02894
N
BTMF_0001220401
Brugia timori
BTMF_0001220401
N
DILT_0000408901
Diphyllobothrium latum
DILT_0000408901
N
EEL_0000119001
Elaeophora elaphi
EEL_0000119001
N
Hba_09393
Heterorhabditis bacteriophora
Hba_09393
N
maker-nMf.1.1.scaf02133-snap-gene-0.11
Meloidogyne floridensis
maker-nMf.1.1.scaf02133-snap-gene-0.11
N
maker-nMf.1.1.scaf03862-augustus-gene-0.3
Meloidogyne floridensis
maker-nMf.1.1.scaf03862-augustus-gene-0.3
N
nAv.1.0.1.g00204
Acanthocheilonema viteae
nAv.1.0.1.g00204
N
nOo.2.0.1.g04238
Onchocerca ochengi
nOo.2.0.1.g04238
N
nRc.2.0.1.g45424
Romanomermis culicivorax
nRc.2.0.1.g45424
N
OFLC_0001260901
Onchocerca flexuosa
OFLC_0001260901
N
SPER_0001490801
Spirometra erinaceieuropaei
SPER_0001490801
N
SPER_0001521401
Spirometra erinaceieuropaei
SPER_0001521401
N