Bo8g069820 (Brassica oleracea)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Bo8g069820 T018733_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF5
M06701_2.00 		Arabidopsis thaliana
WYTTGTCGGN
NCCGACAARW		 Dap-seq
OMalley et al.(2016)
MP_col 		0.929 0.929
ARF8
M01697_2.00 		Arabidopsis thaliana
NHTGTCGGN
NCCGACADN		 PBM
Weirauch et al.(2014)
pTH8661 		0.776 0.776
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo8g069820.1 B3 156 258

Links

Other B3 family TFs
Other Brassica oleracea TFs

513 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA001046 Oryza indica BGIOSGA001046 I 0.701
BGIOSGA007153 Oryza indica BGIOSGA007153 I 0.714
Bo6g099440 Brassica oleracea Bo6g099440 I 0.704
Bra004125 Brassica rapa Bra004125 I 0.704
F775_09040 Aegilops tauschii F775_09040 I 0.724
F775_20129 Aegilops tauschii F775_20129 I 0.710
GLYMA01G27145 Glycine max GLYMA01G27145 I 0.706
GRMZM2G073750 Zea mays GRMZM2G073750 I 0.724
GSMUA_Achr6G19850_001 Musa acuminata GSMUA_Achr6G19850_001 I 0.724
GSMUA_AchrUn_randomG06460_001 Musa acuminata GSMUA_AchrUn_randomG06460_001 I 0.724
LPERR01G22260 Leersia perrieri LPERR01G22260 I 0.701
MLOC_63938 Hordeum vulgare MLOC_63938 I 0.724
OB04G20880 Oryza brachyantha OB04G20880 I 0.701
OBART01G26040 Oryza barthii OBART01G26040 I 0.701
OGLUM01G29850 Oryza glumaepatula OGLUM01G29850 I 0.701
OLONG_023172 Oryza longistaminata OLONG_023172 I 0.701
OMERI01G23690 Oryza meridionalis OMERI01G23690 I 0.701
ONIVA01G29290 Oryza nivara ONIVA01G29290 I 0.701
OPUNC01G25930 Oryza punctata OPUNC01G25930 I 0.701
ORGLA01G0213000 Oryza glaberrima ORGLA01G0213000 I 0.701
ORUFI01G28960 Oryza rufipogon ORUFI01G28960 I 0.701
OS01G0670800 Oryza sativa OS01G0670800 I 0.701
Si004598m.g Setaria italica Si004598m.g I 0.711
Traes_3AL_561A00448 Triticum aestivum Traes_3AL_561A00448 I 0.711
TRAES3BF097400050CFD_g Triticum aestivum TRAES3BF097400050CFD_g I 0.724
Traes_5AS_A86138871 Triticum aestivum Traes_5AS_A86138871 I 0.724
Traes_5BS_3F6023CD6 Triticum aestivum Traes_5BS_3F6023CD6 I 0.724
Traes_5DS_A71D29AE1 Triticum aestivum Traes_5DS_A71D29AE1 I 0.724
TRIUR3_10132 Triticum urartu TRIUR3_10132 I 0.724
TRIUR3_24520 Triticum urartu TRIUR3_24520 I 0.711
e_gw1.64.107.1 Physcomitrella patens e_gw1.64.107.1 I 0.714
estExt_Genewise1.C_140304 Physcomitrella patens estExt_Genewise1.C_140304 I 0.722
estExt_Genewise1.C_2800001 Physcomitrella patens estExt_Genewise1.C_2800001 I 0.711
Carubv10000065m.g Capsella rubella Carubv10000065m.g I 0.714
Pavir.Ab00366 Panicum virgatum Pavir.Ab00366 I 0.724
Pavir.Eb02716 Panicum virgatum Pavir.Eb02716 I 0.704
Pavir.Gb00274 Panicum virgatum Pavir.Gb00274 I 0.725
Pavir.J35323 Panicum virgatum Pavir.J35323 I 0.701
Thhalv10018139m.g Eutrema salsugineum Thhalv10018139m.g I 0.722
ARF19 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001739 N 0.724
CpipJ_CPIJ006385 Culex pipiens CpipJ_CPIJ006385 N
CpipJ_CPIJ018552 Culex pipiens CpipJ_CPIJ018552 N
WUBG_04923 Wuchereria bancrofti WUBG_04923 N
AAEL003558 Aedes aegypti AAEL003558 N
Bm12962 Brugia malayi Bm12962 N
CapteG215623 Capitella teleta CapteG215623 N
CBG25174 Caenorhabditis briggsae CBG25174 N
CBN28364 Caenorhabditis brenneri CBN28364 N
CBN28537 Caenorhabditis brenneri CBN28537 N
CGI_10012805 Crassostrea gigas CGI_10012805 N
CJA30884 Caenorhabditis japonica CJA30884 N
CJA40030 Caenorhabditis japonica CJA40030 N
CPIJ006385 Culex quinquefasciatus CPIJ006385 N
CPIJ018552 Culex quinquefasciatus CPIJ018552 N
EFV52452 Trichinella spiralis EFV52452 N
GM26798 Drosophila sechellia FBgn0181651 N
HelroG184094 Helobdella robusta HelroG184094 N
LOAG_18302 Loa loa LOAG_18302 N
MESCA003372 Megaselia scalaris MESCA003372 N
PPA09748 Pristionchus pacificus PPA09748 N
RPRC014602 Rhodnius prolixus RPRC014602 N
WBGene00237282 Onchocerca volvulus WBGene00237282 N
LCUP009926 Lucilia cuprina LCUP009926 N
AARA001118 Anopheles arabiensis AARA001118 N
AATE005200 Anopheles atroparvus AATE005200 N
ACHR008953 Anopheles christyi ACHR008953 N
ACOM027781 Anopheles coluzzii ACOM027781 N
AMAM012119 Anopheles maculatus AMAM012119 N
AMEC001472 Anopheles melas AMEC001472 N
AMEM006409 Anopheles merus AMEM006409 N
AQUA008305 Anopheles quadriannulatus AQUA008305 N
BGLB003107 Biomphalaria glabrata BGLB003107 N
MDOA007303 Musca domestica MDOA007303 N
ALUE_0000523001 Ascaris lumbricoides ALUE_0000523001 N
ANCCAN_02501 Ancylostoma caninum ANCCAN_02501 N
ANCCEY_04498 Ancylostoma ceylanicum ANCCEY_04498 N
ANCDUO_01800 Ancylostoma duodenale ANCDUO_01800 N
ASIM_0001023101 Anisakis simplex ASIM_0001023101 N
augustus_masked-nMf.1.1.scaf00776-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf00776-processed-gene-0.0 N
BTMF_0000819101 Brugia timori BTMF_0000819101 N
BXY_0681200 Bursaphelenchus xylophilus BXY_0681200 N
CGOC_0000560601 Cylicostephanus goldi CGOC_0000560601 N
D918_05751 Trichuris suis D918_05751 N
DICVIV_09521 Dictyocaulus viviparus DICVIV_09521 N
EEL_0000436501 Elaeophora elaphi EEL_0000436501 N
Hba_16068 Heterorhabditis bacteriophora Hba_16068 N
HPLM_0001120601 Haemonchus placei HPLM_0001120601 N
L893_g14196 Steinernema glaseri L893_g14196 N
L898_g11712 Steinernema monticolum L898_g11712 N
nAv.1.0.1.g03640 Acanthocheilonema viteae nAv.1.0.1.g03640 N
nDi.2.2.2.g01975 Dirofilaria immitis nDi.2.2.2.g01975 N
nLs.2.1.2.g02280 Litomosoides sigmodontis nLs.2.1.2.g02280 N
nOo.2.0.1.g06917 Onchocerca ochengi nOo.2.0.1.g06917 N
nOo.2.0.1.g07994 Onchocerca ochengi nOo.2.0.1.g07994 N
OFLC_0001322801 Onchocerca flexuosa OFLC_0001322801 N
PEQ_0000886501 Parascaris equorum PEQ_0000886501 N
scaffold58-EXSNAP2012.11 Pristionchus exspectatus scaffold58-EXSNAP2012.11 N
SVE_1689300 Strongyloides venezuelensis SVE_1689300 N
TCLT_0000816701 Thelazia callipaeda TCLT_0000816701 N
TCNE_0000027001 Toxocara canis TCNE_0000027001 N
TELCIR_13776 Teladorsagia circumcincta TELCIR_13776 N
TTRE_0000249801 Trichuris trichiura TTRE_0000249801 N