CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G125596
(
Zea mays
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
GRMZM2G125596
T019409_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
IDEF1
M09774_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$IDEF1_Q2
0.842
0.842
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G125596_P01
B3
262
361
LRKELTKSDVANSGRIVLPKKDAEAGLPPLVQGDPLILQMDDMVLPIIWKFKYRFWPNNKSRMYILEAAGEFVKTHGLQAGDALIIYKNSVPGKFIIRGE
Links
Other
B3
family TFs
Other
Zea mays
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI5G26100
Brachypodium distachyon
BRADI5G26100
N
0.000
F775_24378
Aegilops tauschii
F775_24378
N
0.000
MLOC_50915
Hordeum vulgare
MLOC_50915
N
0.000
OPUNC04G27120
Oryza punctata
OPUNC04G27120
N
0.000
ORGLA03G0402000
Oryza glaberrima
ORGLA03G0402000
N
0.000