CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OLONG_016598
(
Oryza longistaminata
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
OLONG_016598
T020168_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OLONG_016598-R1
B3
29
119
FFMVMLGDFHERVTIPNEFLHNFGGKIPKSIKLETRSGLTFDVQVTKNSGRVVLQSGWASYVSAHDLKIGDFLVFKYSGDSQLKTLIFDQS
OLONG_016598-R1
B3
210
303
MNNSSIHGIPCTVEISKKYADVYLPFEDGTVVLQHHGKSWNVRCCLTKQNSKRFLKGWRQFAGDNKLHLGDICLFDLLKDKKKYVMDVHIIRRK
Links
Other
B3
family TFs
Other
Oryza longistaminata
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA013143
Oryza indica
BGIOSGA013143
N
0.960
OB03G34390
Oryza brachyantha
OB03G34390
N
0.779
OMERI03G23750
Oryza meridionalis
OMERI03G23750
N
0.978