POPTR_0005s16320 (Populus trichocarpa)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 POPTR_0005s16320 T020858_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF16
M06708_2.00 		Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA		 Dap-seq
OMalley et al.(2016)
ARF16_col_b 		0.722 0.722
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0005s16320.1 B3 126 228

Links

Other B3 family TFs
Other Populus trichocarpa TFs

190 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PISMIDRAFT_283095 Pisolithus microcarpus PISMIDRAFT_283095 N 0.000
M404DRAFT_998133 Pisolithus tinctorius M404DRAFT_998133 N 0.000
M413DRAFT_216932 Hebeloma cylindrosporum M413DRAFT_216932 N 0.000
Moror_1174 Moniliophthora roreri Moror_1174 N 0.000
Moror_346 Moniliophthora roreri Moror_346 N 0.000
PAXRUDRAFT_15625 Paxillus rubicundulus PAXRUDRAFT_15625 N 0.000
PHACADRAFT_83199 Phanerochaete carnosa PHACADRAFT_83199 N 0.000
PHLGIDRAFT_451232 Phlebiopsis gigantea PHLGIDRAFT_451232 N 0.000
PIIN_04027 Piriformospora indica PIIN_04027 N 0.000
M378DRAFT_155533 Amanita muscaria M378DRAFT_155533 N 0.000
SCHCODRAFT_269947 Schizophyllum commune SCHCODRAFT_269947 N 0.000
SCHCODRAFT_86194 Schizophyllum commune SCHCODRAFT_86194 N 0.000
SCLCIDRAFT_1225180 Scleroderma citrinum SCLCIDRAFT_1225180 N 0.000
SERLA73DRAFT_176212 Serpula lacrymans SERLA73DRAFT_176212 N 0.000
SERLA73DRAFT_66208 Serpula lacrymans SERLA73DRAFT_66208 N 0.000
e_gww2.7.722.1 Phanerochaete chrysosporium e_gww2.7.722.1 N 0.000
gw1.1.1202.1 Heterobasidion annosum gw1.1.1202.1 N 0.000
gw1.8.218.1 Tremella mesenterica gw1.8.218.1 N 0.000
FOMPIDRAFT_1033652 Fomitopsis pinicola FOMPIDRAFT_1033652 N 0.000
AGABI2DRAFT_197789 Agaricus bisporus AGABI2DRAFT_197789 N 0.000
BN946_scf185001.g47 Trametes cinnabarina BN946_scf185001.g47 N 0.000
BOTBODRAFT_112907 Botryobasidium botryosum BOTBODRAFT_112907 N 0.000
BOTBODRAFT_27262 Botryobasidium botryosum BOTBODRAFT_27262 N 0.000
CC1G_03731 Coprinopsis cinerea CC1G_03731 N 0.000
CERSUDRAFT_109864 Ceriporiopsis subvermispora CERSUDRAFT_109864 N 0.000
CY34DRAFT_31562 Suillus luteus CY34DRAFT_31562 N 0.000
DICSQDRAFT_14849 Dichomitus squalens DICSQDRAFT_14849 N 0.000
A1Q1_01999 Trichosporon asahii A1Q1_01999 N 0.000
FOMPIDRAFT_1085863 Fomitopsis pinicola FOMPIDRAFT_1085863 N 0.000
GALMADRAFT_233958 Galerina marginata GALMADRAFT_233958 N 0.000
GLOTRDRAFT_26554 Gloeophyllum trabeum GLOTRDRAFT_26554 N 0.000
HETIRDRAFT_181137 Heterobasidion irregulare HETIRDRAFT_181137 N 0.000
JAAARDRAFT_209121 Jaapia argillacea JAAARDRAFT_209121 N 0.000
K443DRAFT_676063 Laccaria amethystina K443DRAFT_676063 N 0.000
LACBIDRAFT_300881 Laccaria bicolor LACBIDRAFT_300881 N 0.000