CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.0120s0003
(
Capsella grandiflora
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Cagra.0120s0003
T022716_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0120s0003.1.p
B3
14
99
FFKPILPGFNTSILIPEAFYSNYLKGRQEGNTAELRSDMSEMTWIIKMDGRRLSKGWEKFADAHNLQVGDILVFRHEGNLLFHVTP
Cagra.0120s0003.1.p
B3
145
241
FVVPVTASNQRLDSVCLPRGFTNSSGLSKLCKEMILMDEKGRPSKLKLCYKESTNRFCASRGWRAFCCKNGHQTGCFLRLILVRNGKTPVLRVFPLE
Cagra.0120s0003.1.p
B3
296
392
FVVPVTASNQRHDSFNLPKGLTTSSGLSKLCKEIVFMDERGRTSILNLSYDKSSCRFKVRRGWRAFCCRNGHEIGCFLKLILVRNGKTPILRIFPLE
Cagra.0120s0003.1.p
B3
426
521
CFVVSVTVSNLREDRLYLPVRLSRSNILKGKFHEINLMNKHGRTWTLSLKYSKCSRKFSISRGWKCFCEANGQKPGCTFLFKLVRNRKAPVLLMTS
Links
Other
B3
family TFs
Other
Capsella grandiflora
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AALB008413
Anopheles albimanus
AALB008413
N
AARA006674
Anopheles arabiensis
AARA006674
N
AATE007588
Anopheles atroparvus
AATE007588
N
ACHR006655
Anopheles christyi
ACHR006655
N
ACOM041959
Anopheles coluzzii
ACOM041959
N
ADIR005573
Anopheles dirus
ADIR005573
N
AFUN000325
Anopheles funestus
AFUN000325
N
AMEC010601
Anopheles melas
AMEC010601
N
AMIN000140
Anopheles minimus
AMIN000140
N
AQUA004289
Anopheles quadriannulatus
AQUA004289
N