Cagra.11546s0001 (Capsella grandiflora)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Cagra.11546s0001 T022740_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAV1
M01646_2.00 		Arabidopsis thaliana
NCACCTGAHN
NDTCAGGTGN		 PBM
Weirauch et al.(2014)
pTH8592 		0.812 0.812
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.11546s0001.1.p B3 46 157

Links

Other B3 family TFs
Other Capsella grandiflora TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
jazf1b Tetraodon nigroviridis ENSTNIG00000018430 N 0.000
ENSPCAG00000012434 Procavia capensis ENSPCAG00000012434 N 0.000
ENSPFOG00000002162 Poecilia formosa ENSPFOG00000002162 N 0.000
ENSPFOG00000004320 Poecilia formosa ENSPFOG00000004320 N 0.000
ENSPPYG00000017691 Pongo abelii ENSPPYG00000017691 N 0.000
JAZF1 Pan troglodytes ENSPTRG00000019027 N 0.000
Jazf1 Rattus norvegicus ENSRNOG00000027026 N 0.000
JAZF1 Sus scrofa ENSSSCG00000016691 N 0.000
ENSSTOG00000005946 Ictidomys tridecemlineatus ENSSTOG00000005946 N 0.000
JAZF1 Taeniopygia guttata ENSTGUG00000002953 N 0.000
jazf1a Tetraodon nigroviridis ENSTNIG00000009204 N 0.000
jazf1b Oryzias latipes ENSORLG00000007516 N 0.000
jazf1b Takifugu rubripes ENSTRUG00000015434 N 0.000
jazf1a Takifugu rubripes ENSTRUG00000018220 N 0.000
ENSTSYG00000007474 Tarsius syrichta ENSTSYG00000007474 N 0.000
JAZF1 Tursiops truncatus ENSTTRG00000015292 N 0.000
Brh_R011697 Buceros rhinoceros Brh_R011697 N 0.000
Cmyd_10020957 Chelonia mydas Cmyd_10020957 N 0.000
Myotis_brandtii_JAZF1_10034022 Myotis brandtii Myotis_brandtii_JAZF1_10034022 N 0.000
Tal_R005424 Tyto alba Tal_R005424 N 0.000
jazf1 Xenopus tropicalis XB-GENE-950886 N 0.000
ENSGALG00000011126 Gallus gallus ENSGALG00000011126 N 0.000
ENSAPLG00000014482 Anas platyrhynchos ENSAPLG00000014482 N 0.000
ENSBTAG00000019024 Bos taurus ENSBTAG00000019024 N 0.000
JAZF1 Callithrix jacchus ENSCJAG00000008331 N 0.000
ENSCSAG00000014355 Chlorocebus sabaeus ENSCSAG00000014355 N 0.000
jazf1b Danio rerio ENSDARG00000056793 N 0.000
jazf1a Danio rerio ENSDARG00000102551 N 0.000
ENSETEG00000002956 Echinops telfairi ENSETEG00000002956 N 0.000
ENSFCAG00000023035 Felis catus ENSFCAG00000023035 N 0.000
JAZF1 Homo sapiens ENSG00000153814 N 0.000
jazf1b Gasterosteus aculeatus ENSGACG00000008216 N 0.000
ENSAMXG00000000627 Astyanax mexicanus ENSAMXG00000000627 N 0.000
JAZF1 Gorilla gorilla ENSGGOG00000011408 N 0.000
ENSLACG00000009439 Latimeria chalumnae ENSLACG00000009439 N 0.000
ENSLOCG00000011888 Lepisosteus oculatus ENSLOCG00000011888 N 0.000
ENSMGAG00000010727 Meleagris gallopavo ENSMGAG00000010727 N 0.000
ENSMLUG00000013130 Myotis lucifugus ENSMLUG00000013130 N 0.000
Jazf1 Mus musculus ENSMUSG00000063568 N 0.000
JAZF1 Otolemur garnettii ENSOGAG00000029759 N 0.000
ENSONIG00000002950 Oreochromis niloticus ENSONIG00000002950 N 0.000
ENSONIG00000004607 Oreochromis niloticus ENSONIG00000004607 N 0.000