Carubv10010224m.g (Capsella rubella)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Carubv10010224m.g T022851_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
REM19
M06702_2.00 		Arabidopsis thaliana
TKWTTTTTTTTTKKY
RMMAAAAAAAAAWMA		 Dap-seq
OMalley et al.(2016)
REM19_col_a 		0.979 0.979
REM19
M06703_2.00 		Arabidopsis thaliana
NWBTTTTTTTTTTTTKKHHWH
DWDDMMAAAAAAAAAAAAVWN		 Dap-seq
OMalley et al.(2016)
REM19_colamp_a 		0.979 0.979
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10010224m B3 130 224

Links

Other B3 family TFs
Other Capsella rubella TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZBTB34 Pteropus vampyrus ENSPVAG00000017708 N 0.000
zbtb34 Tetraodon nigroviridis ENSTNIG00000001393 N 0.000
ZBTB34 Taeniopygia guttata ENSTGUG00000007424 N 0.000
ZBTB34 Tupaia belangeri ENSTBEG00000001561 N 0.000
ENSSTOG00000009103 Ictidomys tridecemlineatus ENSSTOG00000009103 N 0.000
ENSSSCG00000024939 Sus scrofa ENSSSCG00000024939 N 0.000
ENSSHAG00000012399 Sarcophilus harrisii ENSSHAG00000012399 N 0.000
ZBTB34 Sorex araneus ENSSARG00000004958 N 0.000
Zbtb34 Rattus norvegicus ENSRNOG00000032700 N 0.000
zbtb34 Takifugu rubripes ENSTRUG00000009242 N 0.000
ZBTB34 Pan troglodytes ENSPTRG00000021380 N 0.000
ENSPSIG00000001815 Pelodiscus sinensis ENSPSIG00000001815 N 0.000
ENSPPYG00000019616 Pongo abelii ENSPPYG00000019616 N 0.000
ENSPFOG00000020344 Poecilia formosa ENSPFOG00000020344 N 0.000
zbtb34 Oryzias latipes ENSORLG00000013322 N 0.000
ZBTB34 Ochotona princeps ENSOPRG00000011445 N 0.000
ENSONIG00000010906 Oreochromis niloticus ENSONIG00000010906 N 0.000
ZBTB34 Otolemur garnettii ENSOGAG00000007730 N 0.000
ENSTSYG00000006174 Tarsius syrichta ENSTSYG00000006174 N 0.000
ZBTB34 Tursiops truncatus ENSTTRG00000009610 N 0.000
ZBTB34 Vicugna pacos ENSVPAG00000002927 N 0.000
Aan_R008071 Calypte anna Aan_R008071 N 0.000
Afo_R003405 Aptenodytes forsteri Afo_R003405 N 0.000
Alligator_sinensis_CCG016228.1 Alligator sinensis Alligator_sinensis_CCG016228.1 N 0.000
Brh_R006988 Buceros rhinoceros Brh_R006988 N 0.000
ENSP00000317534-D1 Bos grunniens ENSP00000317534-D1 N 0.000
ENSP00000317534 Macaca fascicularis ENSP00000317534 N 0.000
Gfo_R007894 Geospiza fortis Gfo_R007894 N 0.000
Myotis_brandtii_ZBTB34_10025068 Myotis brandtii Myotis_brandtii_ZBTB34_10025068 N 0.000
Pvit_11039 Pogona vitticeps Pvit_11039 N 0.000
Tal_R000135 Tyto alba Tal_R000135 N 0.000
zbtb34 Xenopus tropicalis XB-GENE-996174 N 0.000
zbtb34.L Xenopus laevis XB-GENE-996175 N 0.000
ZBTB34 Homo sapiens ENSG00000177125 N 0.000
ENSAMEG00000019669 Ailuropoda melanoleuca ENSAMEG00000019669 N 0.000
ENSAMXG00000026343 Astyanax mexicanus ENSAMXG00000026343 N 0.000
ENSAPLG00000001336 Anas platyrhynchos ENSAPLG00000001336 N 0.000
ZBTB34 Bos taurus ENSBTAG00000039343 N 0.000
ZBTB34 Canis familiaris ENSCAFG00000020165 N 0.000
ZBTB34 Callithrix jacchus ENSCJAG00000021856 N 0.000
ZBTB34 Cavia porcellus ENSCPOG00000003791 N 0.000
ENSCSAG00000013684 Chlorocebus sabaeus ENSCSAG00000013684 N 0.000
zbtb34 Danio rerio ENSDARG00000013492 N 0.000
ZBTB34 Dasypus novemcinctus ENSDNOG00000018524 N 0.000
ZBTB34 Equus caballus ENSECAG00000002871 N 0.000
ZBTB34 Erinaceus europaeus ENSEEUG00000005751 N 0.000
ZBTB34 Echinops telfairi ENSETEG00000000911 N 0.000
ENSFALG00000014348 Ficedula albicollis ENSFALG00000014348 N 0.000
ZBTB34 Felis catus ENSFCAG00000026253 N 0.000
ZBTB34 Anolis carolinensis ENSACAG00000004729 N 0.000
zbtb34 Gasterosteus aculeatus ENSGACG00000012017 N 0.000
ZBTB34 Gallus gallus ENSGALG00000023407 N 0.000
ZBTB34 Gorilla gorilla ENSGGOG00000011339 N 0.000
ENSLACG00000015537 Latimeria chalumnae ENSLACG00000015537 N 0.000
ZBTB34 Loxodonta africana ENSLAFG00000008146 N 0.000
ENSLOCG00000001231 Lepisosteus oculatus ENSLOCG00000001231 N 0.000
ZBTB34 Meleagris gallopavo ENSMGAG00000015784 N 0.000
ZBTB34 Myotis lucifugus ENSMLUG00000022408 N 0.000
ENSMMUG00000013641 Macaca mulatta ENSMMUG00000013641 N 0.000
ZBTB34 Monodelphis domestica ENSMODG00000019791 N 0.000
ENSMPUG00000013866 Mustela putorius furo ENSMPUG00000013866 N 0.000
Zbtb34 Mus musculus ENSMUSG00000068966 N 0.000
ENSNLEG00000018999 Nomascus leucogenys ENSNLEG00000018999 N 0.000
ZBTB34 Ornithorhynchus anatinus ENSOANG00000014741 N 0.000
ZBTB34 Oryctolagus cuniculus ENSOCUG00000025964 N 0.000