Carubv10016094m.g (Capsella rubella)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Carubv10016094m.g T022875_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10016094m B3 573 674

Links

Other B3 family TFs
Other Capsella rubella TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_8.187 Carica papaya evm.TU.supercontig_8.187 N 0.990
Solyc06g083600.1 Solanum lycopersicum Solyc06g083600.1 N 0.907
TCM_003056 Theobroma cacao TCM_003056 N 0.969
TRAES3BF066400010CFD_g Triticum aestivum TRAES3BF066400010CFD_g N 0.856
ABI3 Vitis vinifera VIT_07s0005g05400 N 0.928
Cla015213 Citrullus lanatus Cla015213 N 0.878
Pm020417 Prunus mume Pm020417 N 0.907
30204.m001803 Ricinus communis 30204.m001803 N 0.969
cassava2971.m1 Manihot esculenta cassava2971.m1 N 0.876
mgf023017m Mimulus guttatus mgf023017m N 0.907
Aquca_108_00003 Aquilegia coerulea Aquca_108_00003 N 0.907
Ciclev10019039m.g Citrus clementina Ciclev10019039m.g N 0.979
Eucgr.H00815 Eucalyptus grandis Eucgr.H00815 N 0.831
Solyc06g083590.2 Solanum lycopersicum Solyc06g083590.2 N 0.856
gene17562-v1.0-hybrid Fragaria vesca gene17562-v1.0-hybrid N 0.895
Gorai.001G184300 Gossypium raimondii Gorai.001G184300 N 0.979
Lus10011888.g Linum usitatissimum Lus10011888.g N 0.928
MDP0000166580 Malus domestica MDP0000166580 N 0.809
MDP0000309680 Malus domestica MDP0000309680 N 0.918
orange1.1g038867m.g Citrus sinensis orange1.1g038867m.g N 0.969
Pavir.Ea03476 Panicum virgatum Pavir.Ea03476 N 0.887
Pavir.J03563 Panicum virgatum Pavir.J03563 N 0.887
chr1.CM0147.220.nd Lotus japonicus chr1.CM0147.220.nd N 0.918
PDK_20s1318001g001 Phoenix dactylifera PDK_20s1318001g001 N 0.755
ADAC010176 Anopheles darlingi ADAC010176 N 0.000
AEPI005639 Anopheles epiroticus AEPI005639 N 0.000
OGLUM01G45580 Oryza glumaepatula OGLUM01G45580 N 0.867
BGIOSGA000276 Oryza indica BGIOSGA000276 N 0.867
BRADI2G58390 Brachypodium distachyon BRADI2G58390 N 0.887
F775_43744 Aegilops tauschii F775_43744 N 0.856
GLYMA08G47240 Glycine max GLYMA08G47240 N 0.918
GLYMA18G38490 Glycine max GLYMA18G38490 N 0.918
GRMZM2G133398 Zea mays GRMZM2G133398 N 0.887
GSMUA_Achr7G23040_001 Musa acuminata GSMUA_Achr7G23040_001 N 0.918
GSMUA_AchrUn_randomG18520_001 Musa acuminata GSMUA_AchrUn_randomG18520_001 N 0.918
LPERR01G35880 Leersia perrieri LPERR01G35880 N 0.857
MLOC_69727 Hordeum vulgare MLOC_69727 N 0.856
OB01G50120 Oryza brachyantha OB01G50120 N 0.887
OBART01G41410 Oryza barthii OBART01G41410 N 0.867
AMTR_s00049p00034730 Amborella trichopoda AMTR_s00049p00034730 N 0.938
OLONG_001180 Oryza longistaminata OLONG_001180 N 0.802
OMERI01G38380 Oryza meridionalis OMERI01G38380 N 0.802
ONIVA01G46510 Oryza nivara ONIVA01G46510 N 0.867
ORGLA01G0353400 Oryza glaberrima ORGLA01G0353400 N 0.867
ORUFI01G44750 Oryza rufipogon ORUFI01G44750 N 0.867
VP1 Oryza sativa OS01G0911700 N 0.816
PGSC0003DMG400020088 Solanum tuberosum PGSC0003DMG400020088 N 0.907
PGSC0003DMG400020155 Solanum tuberosum PGSC0003DMG400020155 N 0.907
PRUPE_ppa001608mg Prunus persica PRUPE_ppa001608mg N 0.907
Sb03g043480 Sorghum bicolor Sb03g043480 N 0.876
Si000497m.g Setaria italica Si000497m.g N 0.887