Gorai.009G168500 (Gossypium raimondii)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Gorai.009G168500 T023374_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LEC2
M01695_2.00 		Arabidopsis thaliana
MTGCATGC
GCATGCAK		 PBM
Weirauch et al.(2014)
pTH8181 		0.724 0.724
LEC2
M02653_2.00 		Arabidopsis thaliana
NDDYGCATGNN
NNCATGCRHHN		 SELEX
Mathelier et al.(2014)
MA0581.1 		0.724 0.724
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.009G168500.1 B3 201 302

Links

Other B3 family TFs
Other Gossypium raimondii TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LEC2 Arabidopsis thaliana AT1G28300 D 0.732
LEC2 Arabidopsis lyrata fgenesh2_kg.1__2994__AT1G28300.1 I 0.704
POPTR_0011s05380 Populus trichocarpa POPTR_0011s05380 I 0.742
Gorai.006G087600 Gossypium raimondii Gorai.006G087600 I 0.816
Thhalv10009849m.g Eutrema salsugineum Thhalv10009849m.g I 0.714
TCM_029838 Theobroma cacao TCM_029838 N 0.806
cassava45597.m1 Manihot esculenta cassava45597.m1 N 0.740
SapurV1A.0032s0310 Salix purpurea SapurV1A.0032s0310 N 0.735