CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ca02695
(
Panicum virgatum
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Pavir.Ca02695
T023800_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ca02695.1.p
B3
38
128
FFKLMTGDFAQGISIPRKFVSNLNEQVPKGLNLKAPDGKTWFIEVAKNADELLFMSGWDNFAKANELQENDLLIFTRSGNYSFDVQIFDAS
Pavir.Ca02695.1.p
B3
257
356
FVAVLHKTHVGHRNNLLTIHHEFAANHLEGRSHDILLLRPRRKDKWYVRYYHASHTRGFNCHRWVKFVRDNRLRKDYICIFELMKGTRMTTMVVHVLRKV
Links
Other
B3
family TFs
Other
Panicum virgatum
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SCHCODRAFT_67234
Schizophyllum commune
SCHCODRAFT_67234
D
M407DRAFT_24843
Tulasnella calospora
M407DRAFT_24843
I
PGTG_18397
Puccinia graminis
PGTG_18397
I
PAXRUDRAFT_825324
Paxillus rubicundulus
PAXRUDRAFT_825324
I
PAXRUDRAFT_138309
Paxillus rubicundulus
PAXRUDRAFT_138309
I
Moror_17436
Moniliophthora roreri
Moror_17436
I
Moror_1106
Moniliophthora roreri
Moror_1106
I
MELLADRAFT_104422
Melampsora laricipopulina
MELLADRAFT_104422
I
M422DRAFT_38534
Sphaerobolus stellatus
M422DRAFT_38534
I
M422DRAFT_36818
Sphaerobolus stellatus
M422DRAFT_36818
I
M413DRAFT_442869
Hebeloma cylindrosporum
M413DRAFT_442869
I
PHLGIDRAFT_108170
Phlebiopsis gigantea
PHLGIDRAFT_108170
I
M404DRAFT_997952
Pisolithus tinctorius
M404DRAFT_997952
I
M404DRAFT_489064
Pisolithus tinctorius
M404DRAFT_489064
I
M378DRAFT_161851
Amanita muscaria
M378DRAFT_161851
I
M378DRAFT_15001
Amanita muscaria
M378DRAFT_15001
I
LACBIDRAFT_308722
Laccaria bicolor
LACBIDRAFT_308722
I
LACBIDRAFT_302761
Laccaria bicolor
LACBIDRAFT_302761
I
L804_06456
Cryptococcus gattii
L804_06456
I
K443DRAFT_676241
Laccaria amethystina
K443DRAFT_676241
I
PLEOSDRAFT_1113284
Pleurotus ostreatus
PLEOSDRAFT_1113284
I
Genemark.194_g
Heterobasidion annosum
Genemark.194_g
I
EuGene6000619
Heterobasidion annosum
EuGene6000619
I
estExt_Genewise1Plus.C_60615
Heterobasidion annosum
estExt_Genewise1Plus.C_60615
I
fgenesh1_pg.C_scaffold_3000367
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_3000367
I
V565_059490
Rhizoctonia solani
V565_059490
I
SERLA73DRAFT_110825
Serpula lacrymans
SERLA73DRAFT_110825
I
SCLCIDRAFT_21582
Scleroderma citrinum
SCLCIDRAFT_21582
I
SCLCIDRAFT_106216
Scleroderma citrinum
SCLCIDRAFT_106216
I
POSPLDRAFT_19733
Postia placenta
POSPLDRAFT_19733
I
PHACADRAFT_263672
Phanerochaete carnosa
PHACADRAFT_263672
I
PLEOSDRAFT_1097493
Pleurotus ostreatus
PLEOSDRAFT_1097493
I
PISMIDRAFT_29414
Pisolithus microcarpus
PISMIDRAFT_29414
I
PISMIDRAFT_240886
Pisolithus microcarpus
PISMIDRAFT_240886
I
PISMIDRAFT_108067
Pisolithus microcarpus
PISMIDRAFT_108067
I
PILCRDRAFT_827976
Piloderma croceum
PILCRDRAFT_827976
I
PIIN_01713
Piriformospora indica
PIIN_01713
I
PHLGIDRAFT_110627
Phlebiopsis gigantea
PHLGIDRAFT_110627
I
AGABI2DRAFT_206331
Agaricus bisporus
AGABI2DRAFT_206331
I
CADANGAG00004715
Aspergillus niger
CADANGAG00004715
I
GALMADRAFT_161257
Galerina marginata
GALMADRAFT_161257
I
GALMADRAFT_129710
Galerina marginata
GALMADRAFT_129710
I
FOMPIDRAFT_1142296
Fomitopsis pinicola
FOMPIDRAFT_1142296
I
BN946_scf185008.g7
Trametes cinnabarina
BN946_scf185008.g7
I
FOMPIDRAFT_1030155
Fomitopsis pinicola
FOMPIDRAFT_1030155
I
F503_07103
Ophiostoma piceae uamh
F503_07103
I
DACRYDRAFT_21143
Dacryopinax sp
DACRYDRAFT_21143
I
BOTBODRAFT_483871
Botryobasidium botryosum
BOTBODRAFT_483871
I
K443DRAFT_673001
Laccaria amethystina
K443DRAFT_673001
I
CY34DRAFT_798473
Suillus luteus
CY34DRAFT_798473
I
CY34DRAFT_492980
Suillus luteus
CY34DRAFT_492980
I
CY34DRAFT_11126
Suillus luteus
CY34DRAFT_11126
I
CSUB01_05661
Colletotrichum sublineola
CSUB01_05661
I
CNE00840
Cryptococcus neoformans
CNE00840
I
CH063_07756
Colletotrichum higginsianum
CH063_07756
I
CC1G_12055
Coprinopsis cinerea
CC1G_12055
I
CERSUDRAFT_46791
Ceriporiopsis subvermispora
CERSUDRAFT_46791
I
GLOTRDRAFT_75085
Gloeophyllum trabeum
GLOTRDRAFT_75085
I
K443DRAFT_672096
Laccaria amethystina
K443DRAFT_672096
I
JAAARDRAFT_204099
Jaapia argillacea
JAAARDRAFT_204099
I
JAAARDRAFT_188604
Jaapia argillacea
JAAARDRAFT_188604
I
AGABI2DRAFT_193390
Agaricus bisporus
AGABI2DRAFT_193390
I
HYDPIDRAFT_115133
Hydnomerulius pinastri
HYDPIDRAFT_115133
I
AGABI2DRAFT_223295
Agaricus bisporus
AGABI2DRAFT_223295
I
HYDPIDRAFT_114430
Hydnomerulius pinastri
HYDPIDRAFT_114430
I
HETIRDRAFT_459989
Heterobasidion irregulare
HETIRDRAFT_459989
I
AGABI2DRAFT_223670
Agaricus bisporus
AGABI2DRAFT_223670
I
GYMLUDRAFT_42954
Gymnopus luxurians
GYMLUDRAFT_42954
I
GYMLUDRAFT_42558
Gymnopus luxurians
GYMLUDRAFT_42558
I
GLRG_07219
Colletotrichum graminicola
GLRG_07219
I
GALMADRAFT_57068
Galerina marginata
GALMADRAFT_57068
I
EuGene6000029
Heterobasidion annosum
EuGene6000029
N
e_gw1.2.59.1
Tremella mesenterica
e_gw1.2.59.1
N
SERLA73DRAFT_75787
Serpula lacrymans
SERLA73DRAFT_75787
N
Bcin07g03570
Botrytis cinerea
Bcin07g03570
N
PMAA_038720
Penicillium marneffei
PMAA_038720
N
CERSUDRAFT_112798
Ceriporiopsis subvermispora
CERSUDRAFT_112798
N
SCHCODRAFT_269946
Schizophyllum commune
SCHCODRAFT_269946
N
SCHCODRAFT_107740
Schizophyllum commune
SCHCODRAFT_107740
N
PMAA_038720
Talaromyces marneffei
PMAA_038720
N
PILCRDRAFT_824811
Piloderma croceum
PILCRDRAFT_824811
N
CY34DRAFT_804702
Suillus luteus
CY34DRAFT_804702
N
FOMPIDRAFT_1121285
Fomitopsis pinicola
FOMPIDRAFT_1121285
N
PAXRUDRAFT_827363
Paxillus rubicundulus
PAXRUDRAFT_827363
N
M413DRAFT_446927
Hebeloma cylindrosporum
M413DRAFT_446927
N
M408DRAFT_332003
Serendipita vermifera
M408DRAFT_332003
N
M408DRAFT_325522
Serendipita vermifera
M408DRAFT_325522
N
HETIRDRAFT_459850
Heterobasidion irregulare
HETIRDRAFT_459850
N
M404DRAFT_12210
Pisolithus tinctorius
M404DRAFT_12210
N
JAAARDRAFT_123795
Jaapia argillacea
JAAARDRAFT_123795
N
K443DRAFT_679409
Laccaria amethystina
K443DRAFT_679409
N