CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pavir.Cb00421
(
Panicum virgatum
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Pavir.Cb00421
T023806_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Cb00421.1.p
B3
28
116
FFKLMTGDFAQGISIPEKFAKNFDGTRSIDLKAPSGETWNIGVDKHVDELCLVSRWEDFVKAHRLRENDLLVFTCSGNSSSDVLIFEAS
Pavir.Cb00421.1.p
B3
248
347
FVTVLQKSHVRRKSNFLVFPSRFVADHLASRLHEITLVRPNRKDKWCVKYSYALGAQGIRNYTFSMFVQENRLCEGDICAFELMKGARRVTMTVHAIRKV
Links
Other
B3
family TFs
Other
Panicum virgatum
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
WUBG_18030
Wuchereria bancrofti
WUBG_18030
N
ALUE_0000820201
Ascaris lumbricoides
ALUE_0000820201
N
ANCCAN_05011
Ancylostoma caninum
ANCCAN_05011
N
ANCCEY_00716
Ancylostoma ceylanicum
ANCCEY_00716
N
ASU_02185
Ascaris suum
ASU_02185
N
BXY_1069200
Bursaphelenchus xylophilus
BXY_1069200
N
EVEC_0001057401
Enterobius vermicularis
EVEC_0001057401
N
GPLIN_000551300
Globodera pallida
GPLIN_000551300
N
L893_g6895
Steinernema glaseri
L893_g6895
N
OESDEN_10924
Oesophagostomum dentatum
OESDEN_10924
N