CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ga00960
(
Panicum virgatum
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Pavir.Ga00960
T023863_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ga00960.1.p
B3
97
202
FDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAAANEKGLLLSFEDRAGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRGAGEAARDRLFIDWKRRA
Links
Other
B3
family TFs
Other
Panicum virgatum
TFs
324 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MAM_07880
Metarhizium album
MAM_07880
N
fgenesh1_pm.sca_11_chr8_3_0000161
Nectria haematococca
fgenesh1_pm.sca_11_chr8_3_0000161
N
X797_002271
Metarhizium robertsii
X797_002271
N
VDBG_02844
Verticillium alfalfae
VDBG_02844
N
VDAG_03761
Verticillium dahliae
VDAG_03761
N
UV8b_1420
Ustilaginoidea virens
UV8b_1420
N
S40288_00719
Stachybotrys chartarum
S40288_00719
N
S40285_04994
Stachybotrys chlorohalonata
S40285_04994
N
OCS_01728
Ophiocordyceps sinensis
OCS_01728
N
NechaG95819
Fusarium solani
NechaG95819
N
MGU_02426
Metarhizium guizhouense
MGU_02426
N
MBR_01746
Metarhizium brunneum
MBR_01746
N
MAPG_06209
Magnaporthe poae
MAPG_06209
N
MANI_115749
Metarhizium anisopliae
MANI_115749
N
VDBG_02844
Verticillium albo atrum
VDBG_02844
N
MAJ_04177
Metarhizium majus
MAJ_04177
N
GLRG_08213
Colletotrichum graminicola
GLRG_08213
N
FVEG_11185
Fusarium verticillioides
FVEG_11185
N
FPSE_09905
Fusarium pseudograminearum
FPSE_09905
N
FOXG_13751
Fusarium oxysporum
FOXG_13751
N
FGRRES_04459
Fusarium graminearum
FGRRES_04459
N
FFUJ_09949
Fusarium fujikuroi
FFUJ_09949
N
F503_07114
Ophiostoma piceae uamh
F503_07114
N
CSUB01_08191
Colletotrichum sublineola
CSUB01_08191
N
CPUR_04268
Claviceps purpurea
CPUR_04268
N
CH063_12002
Colletotrichum higginsianum
CH063_12002
N
CFIO01_02535
Colletotrichum fioriniae
CFIO01_02535
N