Pavir.J03563 (Panicum virgatum)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Pavir.J03563 T023932_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J03563.1.p B3 536 637

Links

Other B3 family TFs
Other Panicum virgatum TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10016094m.g Capsella rubella Carubv10016094m.g N 0.887
TCM_003056 Theobroma cacao TCM_003056 N 0.897
TRAES3BF066400010CFD_g Triticum aestivum TRAES3BF066400010CFD_g N 0.918
TRIUR3_22986 Triticum urartu TRIUR3_22986 N 0.744
ABI3 Vitis vinifera VIT_07s0005g05400 N 0.897
Ca_21518 Cicer arietinum Ca_21518 N 0.876
Cla015213 Citrullus lanatus Cla015213 N 0.816
Pm020417 Prunus mume Pm020417 N 0.887
30204.m001803 Ricinus communis 30204.m001803 N 0.897
cassava2971.m1 Manihot esculenta cassava2971.m1 N 0.835
cassava34238.m1 Manihot esculenta cassava34238.m1 N 0.876
Cucsa.078480 Cucumis sativus Cucsa.078480 N 0.887
mgf023017m Mimulus guttatus mgf023017m N 0.876
Aquca_108_00003 Aquilegia coerulea Aquca_108_00003 N 0.887
Bostr.19424s0154 Boechera stricta Bostr.19424s0154 N 0.887
Cagra.2774s0002 Capsella grandiflora Cagra.2774s0002 N 0.887
Solyc06g083600.1 Solanum lycopersicum Solyc06g083600.1 N 0.856
Ciclev10019039m.g Citrus clementina Ciclev10019039m.g N 0.897
Eucgr.H00815 Eucalyptus grandis Eucgr.H00815 N 0.783
evm.TU.supercontig_8.187 Carica papaya evm.TU.supercontig_8.187 N 0.897
gene17562-v1.0-hybrid Fragaria vesca gene17562-v1.0-hybrid N 0.832
Gorai.001G184300 Gossypium raimondii Gorai.001G184300 N 0.907
Lus10011888.g Linum usitatissimum Lus10011888.g N 0.897
Lus10022820.g Linum usitatissimum Lus10022820.g N 0.918
MDP0000166580 Malus domestica MDP0000166580 N 0.764
MDP0000309680 Malus domestica MDP0000309680 N 0.887
orange1.1g038867m.g Citrus sinensis orange1.1g038867m.g N 0.887
Pavir.Ea03476 Panicum virgatum Pavir.Ea03476 N 1.000
SapurV1A.0937s0080 Salix purpurea SapurV1A.0937s0080 N 0.897
Thhalv10003110m.g Eutrema salsugineum Thhalv10003110m.g N 0.887
chr1.CM0147.220.nd Lotus japonicus chr1.CM0147.220.nd N 0.887
PDK_20s1318001g001 Phoenix dactylifera PDK_20s1318001g001 N 0.806
OB01G50120 Oryza brachyantha OB01G50120 N 0.979
ABI3 Arabidopsis thaliana AT3G24650 N 0.887
BGIOSGA000276 Oryza indica BGIOSGA000276 N 0.959
Bo3g083650 Brassica oleracea Bo3g083650 N 0.876
Bra013248 Brassica rapa Bra013248 N 0.876
BRADI2G58390 Brachypodium distachyon BRADI2G58390 N 0.948
F775_43744 Aegilops tauschii F775_43744 N 0.918
ABI3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3002399 N 0.887
GLYMA08G47240 Glycine max GLYMA08G47240 N 0.888
GLYMA18G38490 Glycine max GLYMA18G38490 N 0.888
GRMZM2G133398 Zea mays GRMZM2G133398 N 1.000
GSMUA_Achr7G23040_001 Musa acuminata GSMUA_Achr7G23040_001 N 0.918
GSMUA_AchrUn_randomG18520_001 Musa acuminata GSMUA_AchrUn_randomG18520_001 N 0.918
LPERR01G35880 Leersia perrieri LPERR01G35880 N 0.939
MLOC_69727 Hordeum vulgare MLOC_69727 N 0.918
MTR_7g059330 Medicago truncatula MTR_7g059330 N 0.876
AMTR_s00049p00034730 Amborella trichopoda AMTR_s00049p00034730 N 0.897
OBART01G41410 Oryza barthii OBART01G41410 N 0.959
OGLUM01G45580 Oryza glumaepatula OGLUM01G45580 N 0.959
OLONG_001180 Oryza longistaminata OLONG_001180 N 0.896
OMERI01G38380 Oryza meridionalis OMERI01G38380 N 0.896
ONIVA01G46510 Oryza nivara ONIVA01G46510 N 0.959
ORGLA01G0353400 Oryza glaberrima ORGLA01G0353400 N 0.959
ORUFI01G44750 Oryza rufipogon ORUFI01G44750 N 0.959
VP1 Oryza sativa OS01G0911700 N 0.898
PGSC0003DMG400020088 Solanum tuberosum PGSC0003DMG400020088 N 0.866
PGSC0003DMG400020155 Solanum tuberosum PGSC0003DMG400020155 N 0.856
POPTR_0002s25330 Populus trichocarpa POPTR_0002s25330 N 0.918
PRUPE_ppa001608mg Prunus persica PRUPE_ppa001608mg N 0.887
Sb03g043480 Sorghum bicolor Sb03g043480 N 0.990
Si000497m.g Setaria italica Si000497m.g N 1.000
Solyc06g083590.2 Solanum lycopersicum Solyc06g083590.2 N 0.825