CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pavir.J06582
(
Panicum virgatum
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Pavir.J06582
T023936_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J06582.1.p
B3
32
147
FEKVVTPSDVGKLNRLVIPKQHAERYFPALDASAAAAAAAAGAGKGLVLSFEDRAGKAWRFRYSYWNSSQSYVMTKGWSRFVKEKRLGAGDTVLFSRGAGQGPARGRLFIDFRRRR
Links
Other
B3
family TFs
Other
Panicum virgatum
TFs
282 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACA1
Saccharomyces cerevisiae
YER045C
D
CST6
Saccharomyces cerevisiae
YIL036W
D
11010_YIL036W
Saccharomyces mikatae
11010_YIL036W
I
TDEL_0H02360
Torulaspora delbrueckii
TDEL_0H02360
I
TPHA_0C01320
Tetrapisispora phaffii
TPHA_0C01320
I
ZBAI_00866
Zygosaccharomyces bailii
ZBAI_00866
I
ZBAI_06176
Zygosaccharomyces bailii
ZBAI_06176
I
ZYRO0D16214g
Zygosaccharomyces rouxii
ZYRO0D16214g
I
Scas_Contig704.49
Saccharomyces castellii
Scas_Contig704.49
I
TBLA_0D04750
Tetrapisispora blattae
TBLA_0D04750
I
11119_YIL036W
Saccharomyces paradoxus
11119_YIL036W
I
11457_YIL036W
Saccharomyces bayanus
11457_YIL036W
I
6047_YER045C
Saccharomyces mikatae
6047_YER045C
I
6202_YER045C
Saccharomyces paradoxus
6202_YER045C
I
6282_YER045C
Saccharomyces bayanus
6282_YER045C
I
KLTH0A03586g
Kluyveromyces thermotolerans
KLTH0A03586g
I
Kwal_18103
Kluyveromyces waltii
Kwal_18103
I
SAKL0F07898g
Lachancea kluyveri
SAKL0F07898g
I
KAFR_0A02550
Kazachstania africana
KAFR_0A02550
I
AGOS_ADL104W
Ashbya gossypii
AGOS_ADL104W
I
CAGL0I05170g
Candida glabrata
CAGL0I05170g
I
CANTEDRAFT_114387
Candida tenuis
CANTEDRAFT_114387
I
CTRG_04281
Candida tropicalis
CTRG_04281
I
Ecym_4366
Eremothecium cymbalariae
Ecym_4366
I
GNLVRS01_PISO0A10934g
Millerozyma farinosa
GNLVRS01_PISO0A10934g
I
GNLVRS01_PISO0B11001g
Millerozyma farinosa
GNLVRS01_PISO0B11001g
I
AACERI_AaceriADL104W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriADL104W
I
KLLA0_E04269g
Kluyveromyces lactis
KLLA0_E04269g
I
KLTH0A03586g
Lachancea thermotolerans
KLTH0A03586g
I
KNAG_0H02870
Kazachstania naganishii
KNAG_0H02870
I
Kpol_1070p29
Vanderwaltozyma polyspora
Kpol_1070p29
I
NCAS_0A13330
Naumovozyma castellii
NCAS_0A13330
I
NDAI_0A02710
Naumovozyma dairenensis
NDAI_0A02710
I
SPAPADRAFT_130700
Spathaspora passalidarum
SPAPADRAFT_130700
I
BN7_198
Wickerhamomyces ciferrii
BN7_198
N