CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra010720
(
Brassica rapa
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF06217 (GAGA_bind)
IPR010409
Bra010720
T024543_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra010720.1-P
BBR
1
285
MESGGQYDNGRYKPDYYKGTPPSVWNMMPQHQIKEQHNALVMNKKIMSILAERDAALKERNEALAAKKEALAARDEALEQRDKALSERDNAIMERETALNALHYPEKNNLNYILSCAKRGGTEGRSHPPRPPPVSPIPADKNPTKRKKETKQGKKVGDDLNRLAASPGKKCRKDWDVNEVGLNLVAFDETTMPVPMCTCTGTARQCYKWGSGGWQSSCCTTTLSQHPLPQMPNKRHSRMGGRKMSGNVFSRLLSRLAGEGQDLSSPVDLKDYWARHGTNRYITIK
Links
Other
BBR
family TFs
Other
Brassica rapa
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Stat4
Mus musculus
ENSMUSG00000062939
D
STAT4
Homo sapiens
ENSG00000138378
D
ENSOARG00000013903
Ovis aries
ENSOARG00000013903
I
ENSCAFG00000009797
Canis familiaris
ENSCAFG00000009797
I
STAT4
Oryctolagus cuniculus
ENSOCUG00000002466
I
STAT4
Otolemur garnettii
ENSOGAG00000003042
I
STAT4
Ochotona princeps
ENSOPRG00000008636
I
ENSPANG00000022795
Papio anubis
ENSPANG00000022795
I
ENSPPYG00000013028
Pongo abelii
ENSPPYG00000013028
I
ENSPSIG00000010185
Pelodiscus sinensis
ENSPSIG00000010185
I
STAT4
Pteropus vampyrus
ENSPVAG00000004736
I
Stat1
Rattus norvegicus
ENSRNOG00000014079
I
STAT4
Sus scrofa
ENSSSCG00000016059
I
STAT4
Tursiops truncatus
ENSTTRG00000001136
I
STAT4
Vicugna pacos
ENSVPAG00000011545
I
Brh_R001450
Buceros rhinoceros
Brh_R001450
I
ENSP00000351255-D1
Bos grunniens
ENSP00000351255-D1
I
Tal_R001379
Tyto alba
Tal_R001379
I
ENSNLEG00000006726
Nomascus leucogenys
ENSNLEG00000006726
I
STAT1
Bos taurus
ENSBTAG00000007867
I
STAT4
Choloepus hoffmanni
ENSCHOG00000006838
I
STAT4
Callithrix jacchus
ENSCJAG00000005895
I
ENSCSAG00000012146
Chlorocebus sabaeus
ENSCSAG00000012146
I
Stat4
Dipodomys ordii
ENSDORG00000011535
I
STAT4
Equus caballus
ENSECAG00000023170
I
STAT4
Erinaceus europaeus
ENSEEUG00000002778
I
STAT4
Felis catus
ENSFCAG00000018634
I
ENSGALG00000025974
Gallus gallus
ENSGALG00000025974
I
STAT4
Loxodonta africana
ENSLAFG00000012299
I
STAT4
Meleagris gallopavo
ENSMGAG00000016413
I
STAT4
Macaca mulatta
ENSMMUG00000005617
I
STAT4
Monodelphis domestica
ENSMODG00000011767
I
ENSMPUG00000012539
Mustela putorius furo
ENSMPUG00000012539
I
ENSOANG00000031223
Ornithorhynchus anatinus
ENSOANG00000031223
I
XP_002937488
Xenopus tropicalis
XP_002937488
N