CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cla016126
(
Citrullus lanatus
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF06217 (GAGA_bind)
IPR010409
Cla016126
T024779_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla016126
BBR
1
313
MDDGRQHENGRHKLDYFRGGPSPWNMVPPHHVKEPNALVMNKKIMSIIAERDAAIRERNLALSEKNDALAARDEALRQRDEALAQRDSALMERDNALAALEIRDNASNFPLGGGIQRKTKRLHHLSNHMPNMSETPYGTKDVHITDAFPITVIASEAVKSQQGKRIKDNKSVSSKTSKLPRKKVGEDLNRHAATDGTKYRTDWDGQDVGLNLISFDDSSMPAPICSCTGLARQCYKWGNGGWQSSCCTTHMSMYPLPHMPNKRHARMGGRKMSGSVFTKLLSRLAAAGHDLSVPVDLKDHWARHGTNRYITIR
Links
Other
BBR
family TFs
Other
Citrullus lanatus
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo8g082820
Brassica oleracea
Bo8g082820
N
Bo8g082840
Brassica oleracea
Bo8g082840
N
BRADI3G07987
Brachypodium distachyon
BRADI3G07987
N
F775_12196
Aegilops tauschii
F775_12196
N
OB05G10170
Oryza brachyantha
OB05G10170
N
OGLUM01G24300
Oryza glumaepatula
OGLUM01G24300
N
OLONG_021595
Oryza longistaminata
OLONG_021595
N
ONIVA01G23240
Oryza nivara
ONIVA01G23240
N
OPUNC01G20840
Oryza punctata
OPUNC01G20840
N
ORUFI01G23320
Oryza rufipogon
ORUFI01G23320
N
Traes_7AL_ED205638C
Triticum aestivum
Traes_7AL_ED205638C
N
Traes_7DL_2B62A6D74
Triticum aestivum
Traes_7DL_2B62A6D74
N
TRIUR3_11795
Triticum urartu
TRIUR3_11795
N
Thhalv10010289m.g
Eutrema salsugineum
Thhalv10010289m.g
N