CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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30068.m002670
(
Ricinus communis
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF06217 (GAGA_bind)
IPR010409
30068.m002670
T024789_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
30068.m002670
BBR
8
230
NHLIPEASTGASLPHFAWFYPGSFYSAPKTNSIHSQGSQIDEPILPVPPICSIAPAAEPAKNNNSGAKPAKARKQKPSAKGSNQIPSKTFKLKQPRKTSKKKGQSMPEAKREKRNINVDIGRMNFDLSGVPSPFCSCTGMPRVCYKWGAGGWQSSCCTTNISEYPLPMSAARPGARMAGRKMSNGAYLKLLLKLAAEGYDLSHPVDLKEHWARHGTNKFVTIK
Links
Other
BBR
family TFs
Other
Ricinus communis
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MESCA002178
Megaselia scalaris
MESCA002178
N
0.000
ENSORLG00000003513
Oryzias latipes
ENSORLG00000003513
N
0.000
ENSPANG00000026135
Papio anubis
ENSPANG00000026135
N
0.000
ENSPFOG00000022630
Poecilia formosa
ENSPFOG00000022630
N
0.000
ENSPSIG00000016444
Pelodiscus sinensis
ENSPSIG00000016444
N
0.000
L3MBTL1
Pan troglodytes
ENSPTRG00000013507
N
0.000
L3MBTL1
Pteropus vampyrus
ENSPVAG00000015234
N
0.000
L3mbtl1
Rattus norvegicus
ENSRNOG00000007044
N
0.000
ENSSSCG00000007365
Sus scrofa
ENSSSCG00000007365
N
0.000
ENSSTOG00000011672
Ictidomys tridecemlineatus
ENSSTOG00000011672
N
0.000
ENSTNIG00000012014
Tetraodon nigroviridis
ENSTNIG00000012014
N
0.000
ENSTSYG00000014180
Tarsius syrichta
ENSTSYG00000014180
N
0.000
L3MBTL1
Tursiops truncatus
ENSTTRG00000012844
N
0.000
ENSXMAG00000019188
Xiphophorus maculatus
ENSXMAG00000019188
N
0.000
L3MBTL1
Ochotona princeps
ENSOPRG00000002367
N
0.000
ENSP00000362227
Macaca fascicularis
ENSP00000362227
N
0.000
Myotis_brandtii_L3MBTL1_10025184
Myotis brandtii
Myotis_brandtii_L3MBTL1_10025184
N
0.000
Ogr13959
Ophisaurus gracilis
Ogr13959
N
0.000
estExt_fgenesh2_pg.C_5980016
Branchiostoma floridae
estExt_fgenesh2_pg.C_5980016
N
0.000
Ocbimv22028662m.g
Octopus bimaculoides
Ocbimv22028662m.g
N
0.000
l3mbtl1
Xenopus tropicalis
XB-GENE-949999
N
0.000
AMEM007577
Anopheles merus
AMEM007577
N
0.000
ANCDUO_13707
Ancylostoma duodenale
ANCDUO_13707
N
0.000
HPBE_0001834901
Heligmosomoides bakeri
HPBE_0001834901
N
0.000
L892_g7301
Steinernema scapterisci
L892_g7301
N
0.000
L898_g12863
Steinernema monticolum
L898_g12863
N
0.000
SVUK_0001589601
Strongylus vulgaris
SVUK_0001589601
N
0.000
L3MBTL1
Gorilla gorilla
ENSGGOG00000034980
N
0.000
ENSAMEG00000003728
Ailuropoda melanoleuca
ENSAMEG00000003728
N
0.000
ENSAMXG00000008822
Astyanax mexicanus
ENSAMXG00000008822
N
0.000
L3MBTL1
Canis familiaris
ENSCAFG00000009291
N
0.000
L3MBTL1
Choloepus hoffmanni
ENSCHOG00000005052
N
0.000
L3MBTL1
Callithrix jacchus
ENSCJAG00000003964
N
0.000
ENSCSAG00000014035
Chlorocebus sabaeus
ENSCSAG00000014035
N
0.000
l3mbtl1a
Danio rerio
ENSDARG00000014828
N
0.000
L3mbtl1
Dipodomys ordii
ENSDORG00000002707
N
0.000
L3MBTL1
Equus caballus
ENSECAG00000008175
N
0.000
L3MBTL1
Erinaceus europaeus
ENSEEUG00000006232
N
0.000
ENSETEG00000013916
Echinops telfairi
ENSETEG00000013916
N
0.000
L3MBTL1
Homo sapiens
ENSG00000185513
N
0.000
ENSGACG00000006074
Gasterosteus aculeatus
ENSGACG00000006074
N
0.000
L3MBTL1
Anolis carolinensis
ENSACAG00000002143
N
0.000
ENSGMOG00000006059
Gadus morhua
ENSGMOG00000006059
N
0.000
L3MBTL1
Microcebus murinus
ENSMICG00000015115
N
0.000
ENSMLUG00000016624
Myotis lucifugus
ENSMLUG00000016624
N
0.000
L3MBTL1
Monodelphis domestica
ENSMODG00000003647
N
0.000
ENSMPUG00000017691
Mustela putorius furo
ENSMPUG00000017691
N
0.000
L3mbtl1
Mus musculus
ENSMUSG00000035576
N
0.000
ENSNLEG00000006529
Nomascus leucogenys
ENSNLEG00000006529
N
0.000
L3MBTL1
Ornithorhynchus anatinus
ENSOANG00000014344
N
0.000
ENSOARG00000003176
Ovis aries
ENSOARG00000003176
N
0.000
L3MBTL1
Oryctolagus cuniculus
ENSOCUG00000006662
N
0.000
L3MBTL1
Otolemur garnettii
ENSOGAG00000014470
N
0.000
ENSONIG00000001923
Oreochromis niloticus
ENSONIG00000001923
N
0.000