cassava38274.valid.m1 (Manihot esculenta)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 cassava38274.valid.m1 T024797_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava38274.valid.m1 BBR 1 310

Links

Other BBR family TFs
Other Manihot esculenta TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold_200704.1 Arabidopsis lyrata scaffold_200704.1 I 0.745
Ocbimv22014894m.g Octopus bimaculoides Ocbimv22014894m.g I 1.000
POPTR_0004s17060 Populus trichocarpa POPTR_0004s17060 N 0.784
POPTR_0009s12820 Populus trichocarpa POPTR_0009s12820 N 0.795
30131.m007143 Ricinus communis 30131.m007143 N 0.842
cassava24959.valid.m1 Manihot esculenta cassava24959.valid.m1 N 0.839
Ciclev10028887m.g Citrus clementina Ciclev10028887m.g N 0.711
evm.TU.supercontig_150.9 Carica papaya evm.TU.supercontig_150.9 N 0.747
orange1.1g021524m.g Citrus sinensis orange1.1g021524m.g N 0.753
SapurV1A.0091s0140 Salix purpurea SapurV1A.0091s0140 N 0.751
SapurV1A.0379s0280 Salix purpurea SapurV1A.0379s0280 N 0.770